» Articles » PMID: 29371062

Mechanistic DNA Damage Simulations in Geant4-DNA Part 2: Electron and Proton Damage in a Bacterial Cell

Overview
Journal Phys Med
Date 2018 Jan 27
PMID 29371062
Citations 26
Authors
Affiliations
Soon will be listed here.
Abstract

We extended a generic Geant4 application for mechanistic DNA damage simulations to an Escherichia coli cell geometry, finding electron damage yields and proton damage yields largely in line with experimental results. Depending on the simulation of radical scavenging, electrons double strand breaks (DSBs) yields range from 0.004 to 0.010 DSB Gy Mbp, while protons have yields ranging from 0.004 DSB Gy Mbp at low LETs and with strict assumptions concerning scavenging, up to 0.020 DSB Gy Mbp at high LETs and when scavenging is weakest. Mechanistic DNA damage simulations can provide important limits on the extent to which physical processes can impact biology in low background experiments. We demonstrate the utility of these studies for low dose radiation biology calculating that in E. coli, the median rate at which the radiation background induces double strand breaks is 2.8 × 10 DSB day, significantly less than the mutation rate per generation measured in E. coli, which is on the order of 10.

Citing Articles

Position in proton Bragg curve influences DNA damage complexity and survival in head and neck cancer cells.

Heemskerk T, Groenendijk C, Rovituso M, van der Wal E, van Burik W, Chatzipapas K Clin Transl Radiat Oncol. 2025; 51:100908.

PMID: 39877299 PMC: 11772976. DOI: 10.1016/j.ctro.2024.100908.


Effects of Differing Underlying Assumptions in In Silico Models on Predictions of DNA Damage and Repair.

Warmenhoven J, Henthorn N, McNamara A, Ingram S, Merchant M, Kirkby K Radiat Res. 2023; 200(6):509-522.

PMID: 38014593 PMC: 11590750. DOI: 10.1667/RADE-21-00147.1.


Assessing radiation dosimetry for microorganisms in naturally radioactive mineral springs using GATE and Geant4-DNA Monte Carlo simulations.

Kolovi S, Fois G, Lanouar S, Chardon P, Miallier D, Baker L PLoS One. 2023; 18(10):e0292608.

PMID: 37824461 PMC: 10569590. DOI: 10.1371/journal.pone.0292608.


Application of Geant4-DNA for simulating water radiolysis induced by Auger electron-emitting radionuclides.

Adjei D, Trinh N, Mostafavi M J Radiat Res. 2023; 64(2):369-378.

PMID: 36702611 PMC: 10036101. DOI: 10.1093/jrr/rrac105.


Prediction of DNA rejoining kinetics and cell survival after proton irradiation for V79 cells using Geant4-DNA.

Sakata D, Hirayama R, Shin W, Belli M, Tabocchini M, Stewart R Phys Med. 2022; 105:102508.

PMID: 36549067 PMC: 11221566. DOI: 10.1016/j.ejmp.2022.11.012.