Genome Sequence of JL1095T (DSM 28604T) Isolated from the Yangtze Estuary

Overview

Journal Stand Genomic Sci

Publisher Biomed Central

Specialty Genetics

Date 2018 Jan 5

PMID 29299111

Authors

Lei Hou

Jia Sun

Xiabing Xie

Nianzhi Jiao

Yao Zhang

Affiliations

Soon will be listed here.

Abstract

JL1095 is a proteobacterium from a genus belonging to the family ; it was isolated from surface waters of the Yangtze Estuary, China. This strain displays the capability to utilize aromatic and simple carbon compounds. Here, we present the genome sequence, annotations, and features of JL1095. This strain has a genome size of 5,043,263 bp with a G + C content of 68.63%. The genome contains 4286 protein-coding genes, 56 RNA genes, and 83 pseudo genes. Many of the protein-coding genes were predicted to encode proteins involved in carbon metabolism pathways, such as aromatic degradation and methane metabolism. Notably, a total of 31 genes were predicted to encode form II carbon monoxide dehydrogenases, suggesting potential for carbon monoxide oxidation. The genome analysis helps better understand the major carbon metabolic pathways of this strain and its role in carbon cycling in coastal marine ecosystems.

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