Li C, Xu J, Zhang Y, Ding Y, Zhou X, Su Z
J Anim Sci. 2024; 102.
PMID: 39565284
PMC: 11641427.
DOI: 10.1093/jas/skae357.
Aloui C, Neumann L, Bergametti F, Sartori E, Herbreteau M, Maillard A
JAMA Netw Open. 2024; 7(4):e247034.
PMID: 38630472
PMC: 11024774.
DOI: 10.1001/jamanetworkopen.2024.7034.
Tan Y, Zheng T, Su Z, Chen M, Chen S, Zhang R
JCI Insight. 2023; 8(18).
PMID: 37737260
PMC: 10561724.
DOI: 10.1172/jci.insight.162893.
Cao J, Kuyumcu-Martinez M
Cardiovasc Res. 2023; 119(6):1324-1335.
PMID: 36657944
PMC: 10262186.
DOI: 10.1093/cvr/cvad014.
Xiong M, Li W, Wang L, Chen L, Chen Z, Wei C
BMC Cancer. 2022; 22(1):1026.
PMID: 36175880
PMC: 9520876.
DOI: 10.1186/s12885-022-10103-7.
Alternative polyadenylation associated with prognosis and therapy in colorectal cancer.
Zhang Y, Xu Y, Wang Y
Sci Rep. 2022; 12(1):7036.
PMID: 35487956
PMC: 9054804.
DOI: 10.1038/s41598-022-11089-9.
A computational pipeline to infer alternative poly-adenylation from 3' sequencing data.
Yalamanchili H, Elrod N, Jensen M, Ji P, Lin A, Wagner E
Methods Enzymol. 2021; 655:185-204.
PMID: 34183121
PMC: 10866047.
DOI: 10.1016/bs.mie.2021.04.001.
Understanding RNA Binding by the Nonclassical Zinc Finger Protein CPSF30, a Key Factor in Polyadenylation during Pre-mRNA Processing.
Pritts J, Oluyadi A, Huang W, Shimberg G, Kane M, Wilks A
Biochemistry. 2021; 60(10):780-790.
PMID: 33615774
PMC: 8575367.
DOI: 10.1021/acs.biochem.0c00940.
Alternative polyadenylation of mRNA and its role in cancer.
Yuan F, Hankey W, Wagner E, Li W, Wang Q
Genes Dis. 2021; 8(1):61-72.
PMID: 33569514
PMC: 7859462.
DOI: 10.1016/j.gendis.2019.10.011.
Alternative polyadenylation: methods, mechanism, function, and role in cancer.
Zhang Y, Liu L, Qiu Q, Zhou Q, Ding J, Lu Y
J Exp Clin Cancer Res. 2021; 40(1):51.
PMID: 33526057
PMC: 7852185.
DOI: 10.1186/s13046-021-01852-7.
Emerging cellular and molecular determinants of idiopathic pulmonary fibrosis.
Phan T, Paliogiannis P, Nasrallah G, Giordo R, Eid A, Fois A
Cell Mol Life Sci. 2020; 78(5):2031-2057.
PMID: 33201251
PMC: 7669490.
DOI: 10.1007/s00018-020-03693-7.
Animal-APAdb: a comprehensive animal alternative polyadenylation database.
Jin W, Zhu Q, Yang Y, Yang W, Wang D, Yang J
Nucleic Acids Res. 2020; 49(D1):D47-D54.
PMID: 32986825
PMC: 7779049.
DOI: 10.1093/nar/gkaa778.
PolyA-miner: accurate assessment of differential alternative poly-adenylation from 3'Seq data using vector projections and non-negative matrix factorization.
Yalamanchili H, Alcott C, Ji P, Wagner E, Zoghbi H, Liu Z
Nucleic Acids Res. 2020; 48(12):e69.
PMID: 32463457
PMC: 7337927.
DOI: 10.1093/nar/gkaa398.
Unraveling the RNA Binding Properties of the Iron-Sulfur Zinc Finger Protein CPSF30.
Pritts J, Hursey M, Michalek J, Batelu S, Stemmler T, Michel S
Biochemistry. 2020; 59(8):970-982.
PMID: 32027124
PMC: 8575264.
DOI: 10.1021/acs.biochem.9b01065.
Stiff matrix instigates type I collagen biogenesis by mammalian cleavage factor I complex-mediated alternative polyadenylation.
Zhou Z, Qu J, He L, Zhu Y, Yang S, Zhang F
JCI Insight. 2020; 5(3).
PMID: 31935199
PMC: 7098798.
DOI: 10.1172/jci.insight.133972.
The DEAD-box RNA helicase SHI2 functions in repression of salt-inducible genes and regulation of cold-inducible gene splicing.
Wang B, Chai H, Zhong Y, Shen Y, Yang W, Chen J
J Exp Bot. 2019; 71(4):1598-1613.
PMID: 31745559
PMC: 7242002.
DOI: 10.1093/jxb/erz523.
Template-switching artifacts resemble alternative polyadenylation.
Balazs Z, Tombacz D, Csabai Z, Moldovan N, Snyder M, Boldogkoi Z
BMC Genomics. 2019; 20(1):824.
PMID: 31703623
PMC: 6839120.
DOI: 10.1186/s12864-019-6199-7.
SNP2APA: a database for evaluating effects of genetic variants on alternative polyadenylation in human cancers.
Yang Y, Zhang Q, Miao Y, Yang J, Yang W, Yu F
Nucleic Acids Res. 2019; 48(D1):D226-D232.
PMID: 31511885
PMC: 6943033.
DOI: 10.1093/nar/gkz793.
The Length of the Expressed 3' UTR Is an Intermediate Molecular Phenotype Linking Genetic Variants to Complex Diseases.
Mariella E, Marotta F, Grassi E, Gilotto S, Provero P
Front Genet. 2019; 10:714.
PMID: 31475030
PMC: 6707137.
DOI: 10.3389/fgene.2019.00714.
Tissue-specific mechanisms of alternative polyadenylation: Testis, brain, and beyond (2018 update).
MacDonald C
Wiley Interdiscip Rev RNA. 2019; 10(4):e1526.
PMID: 30816016
PMC: 6617714.
DOI: 10.1002/wrna.1526.