» Articles » PMID: 29199104

Reverse Engineering the Cancer Metabolic Network Using Flux Analysis to Understand Drivers of Human Disease

Overview
Journal Metab Eng
Date 2017 Dec 5
PMID 29199104
Citations 19
Authors
Affiliations
Soon will be listed here.
Abstract

Metabolic dysfunction has reemerged as an essential hallmark of tumorigenesis, and metabolic phenotypes are increasingly being integrated into pre-clinical models of disease. The complexity of these metabolic networks requires systems-level interrogation, and metabolic flux analysis (MFA) with stable isotope tracing present a suitable conceptual framework for such systems. Here we review efforts to elucidate mechanisms through which metabolism influences tumor growth and survival, with an emphasis on applications using stable isotope tracing and MFA. Through these approaches researchers can now quantify pathway fluxes in various in vitro and in vivo contexts to provide mechanistic insights at molecular and physiological scales respectively. Knowledge and discoveries in cancer models are paving the way toward applications in other biological contexts and disease models. In turn, MFA approaches will increasingly help to uncover new therapeutic opportunities that enhance human health.

Citing Articles

Metabolic and transcriptomic reprogramming during contact inhibition-induced quiescence is mediated by YAP-dependent and YAP-independent mechanisms.

Kang S, Antoniewicz M, Hay N Nat Commun. 2024; 15(1):6777.

PMID: 39117624 PMC: 11310444. DOI: 10.1038/s41467-024-51117-y.


NK cells as powerful therapeutic tool in cancer immunotherapy.

Huang M, Liu Y, Yan Q, Peng M, Ge J, Mo Y Cell Oncol (Dordr). 2024; 47(3):733-757.

PMID: 38170381 DOI: 10.1007/s13402-023-00909-3.


Improved 13C metabolic flux analysis in Escherichia coli metabolism: application of a high-resolution MS (GC-EI-QTOF) for comprehensive assessment of MS/MS fragments.

Richter C, Grafahrend-Belau E, Ziegler J, Raorane M, Junker B J Ind Microbiol Biotechnol. 2023; 50(1).

PMID: 37960978 PMC: 10716738. DOI: 10.1093/jimb/kuad039.


3D Chemical Imaging by Fluorescence-detected Mid-Infrared Photothermal Fourier Light Field Microscopy.

Jia D, Zhang Y, Yang Q, Xue Y, Tan Y, Guo Z Chem Biomed Imaging. 2023; 1(3):260-267.

PMID: 37388959 PMC: 10302888. DOI: 10.1021/cbmi.3c00022.


Mapping glycine uptake and its metabolic conversion to glutathione in mouse mammary tumors using functional mass spectrometry imaging.

Mellinger A, Kibbe R, Rabbani Z, Meritet D, Muddiman D, Gamcsik M Free Radic Biol Med. 2022; 193(Pt 2):677-684.

PMID: 36402437 PMC: 9737053. DOI: 10.1016/j.freeradbiomed.2022.11.010.


References
1.
Chaumeil M, Larson P, Woods S, Cai L, Eriksson P, Robinson A . Hyperpolarized [1-13C] glutamate: a metabolic imaging biomarker of IDH1 mutational status in glioma. Cancer Res. 2014; 74(16):4247-57. PMC: 4134724. DOI: 10.1158/0008-5472.CAN-14-0680. View

2.
Yao C, Fowle-Grider R, Mahieu N, Liu G, Chen Y, Wang R . Exogenous Fatty Acids Are the Preferred Source of Membrane Lipids in Proliferating Fibroblasts. Cell Chem Biol. 2016; 23(4):483-93. PMC: 5510604. DOI: 10.1016/j.chembiol.2016.03.007. View

3.
Warburg O, Wind F, Negelein E . THE METABOLISM OF TUMORS IN THE BODY. J Gen Physiol. 2009; 8(6):519-30. PMC: 2140820. DOI: 10.1085/jgp.8.6.519. View

4.
Maddocks O, Berkers C, Mason S, Zheng L, Blyth K, Gottlieb E . Serine starvation induces stress and p53-dependent metabolic remodelling in cancer cells. Nature. 2012; 493(7433):542-6. PMC: 6485472. DOI: 10.1038/nature11743. View

5.
Cardaci S, Zheng L, Mackay G, van den Broek N, MacKenzie E, Nixon C . Pyruvate carboxylation enables growth of SDH-deficient cells by supporting aspartate biosynthesis. Nat Cell Biol. 2015; 17(10):1317-26. PMC: 4591470. DOI: 10.1038/ncb3233. View