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Genetic and Epigenetic Variation in Following the Oil Spill

Overview
Journal Evol Appl
Specialty Biology
Date 2017 Nov 21
PMID 29151871
Citations 25
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Abstract

Catastrophic events offer unique opportunities to study rapid population response to stress in natural settings. In concert with genetic variation, epigenetic mechanisms may allow populations to persist through severe environmental challenges. In 2010, the oil spill devastated large portions of the coastline along the Gulf of Mexico. However, the foundational salt marsh grass, , showed high resilience to this strong environmental disturbance. Following the spill, we simultaneously examined the genetic and epigenetic structure of recovering populations of to oil exposure. We quantified genetic and DNA methylation variation using amplified fragment length polymorphism and methylation sensitive fragment length polymorphism (MS-AFLP) to test the hypothesis that response to oil exposure in resulted in genetically and epigenetically based population differentiation. We found high genetic and epigenetic variation within and among sites and found significant genetic differentiation between contaminated and uncontaminated sites, which may reflect nonrandom mortality in response to oil exposure. Additionally, despite a lack of genomewide patterns in DNA methylation between contaminated and uncontaminated sites, we found five MS-AFLP loci (12% of polymorphic MS-AFLP loci) that were correlated with oil exposure. Overall, our findings support genetically based differentiation correlated with exposure to the oil spill in this system, but also suggest a potential role for epigenetic mechanisms in population differentiation.

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References
1.
van Gurp T, Wagemaker N, Wouters B, Vergeer P, Ouborg J, Verhoeven K . epiGBS: reference-free reduced representation bisulfite sequencing. Nat Methods. 2016; 13(4):322-4. DOI: 10.1038/nmeth.3763. View

2.
Keller T, Lasky J, Yi S . The multivariate association between genomewide DNA methylation and climate across the range of Arabidopsis thaliana. Mol Ecol. 2016; 25(8):1823-37. DOI: 10.1111/mec.13573. View

3.
Gao L, Geng Y, Li B, Chen J, Yang J . Genome-wide DNA methylation alterations of Alternanthera philoxeroides in natural and manipulated habitats: implications for epigenetic regulation of rapid responses to environmental fluctuation and phenotypic variation. Plant Cell Environ. 2010; 33(11):1820-7. DOI: 10.1111/j.1365-3040.2010.02186.x. View

4.
Xie H, Li H, Liu D, Dai W, He J, Lin S . ICE1 demethylation drives the range expansion of a plant invader through cold tolerance divergence. Mol Ecol. 2015; 24(4):835-50. DOI: 10.1111/mec.13067. View

5.
Laland K, Uller T, Feldman M, Sterelny K, Muller G, Moczek A . Does evolutionary theory need a rethink?. Nature. 2014; 514(7521):161-4. DOI: 10.1038/514161a. View