The Potential Impact of Nanopore Sequencing on Human Genetics
Overview
Molecular Biology
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Nanopore sequencing has been available to researchers for a little over 3 years. Recently, the milestone of sequencing and assembling a human genome on this platform was achieved for the first time. Significant improvements to the platform in yield and accuracy, coupled with higher throughput nanopore sequencers, mean that human genome sequencing at scale is now possible. Here, a brief recent history of the nanopore platform is provided, key papers and innovations are highlighted and some of the challenges for the future are discussed.
Characterizing Prion-Like Protein Aggregation: Emerging Nanopore-Based Approaches.
Meyer N, Torrent J, Balme S Small Methods. 2024; 8(12):e2400058.
PMID: 38644684 PMC: 11672191. DOI: 10.1002/smtd.202400058.
Zhuang J, Jiang Y, Chen Y, Mao A, Chen J, Chen C Mol Genet Genomic Med. 2024; 12(1):e2365.
PMID: 38284449 PMC: 10801340. DOI: 10.1002/mgg3.2365.
Genomic Sequencing to Diagnose Prosthetic Joint Infection in the Knee: A Case Report.
Wilkinson H, McCarthy H, Perry J, Smith T, Wright K, Cool P Cureus. 2023; 15(5):e38788.
PMID: 37303456 PMC: 10250129. DOI: 10.7759/cureus.38788.
Critical length in long-read resequencing.
De Coster W, Strazisar M, De Rijk P NAR Genom Bioinform. 2021; 2(1):lqz027.
PMID: 33575574 PMC: 7671308. DOI: 10.1093/nargab/lqz027.
Portable sequencing, genomic data, and scale in global emerging infectious disease surveillance.
Shaw L, Sugden N Geo. 2020; 5(2):e00066.
PMID: 32337052 PMC: 7165603. DOI: 10.1002/geo2.66.