» Articles » PMID: 28678423

How Osmolytes Counteract Pressure Denaturation on a Molecular Scale

Overview
Journal Chemphyschem
Specialty Chemistry
Date 2017 Jul 6
PMID 28678423
Citations 3
Authors
Affiliations
Soon will be listed here.
Abstract

Life in the deep sea exposes enzymes to high hydrostatic pressure, which decreases their stability. For survival, deep sea organisms tend to accumulate various osmolytes, most notably trimethylamine N-oxide used by fish, to counteract pressure denaturation. However, exactly how these osmolytes work remains unclear. Here, a rigorous statistical thermodynamics approach is used to clarify the mechanism of osmoprotection. It is shown that the weak, nonspecific, and dynamic interactions of water and osmolytes with proteins can be characterized only statistically, and that the competition between protein-osmolyte and protein-water interactions is crucial in determining conformational stability. Osmoprotection is driven by a stronger exclusion of osmolytes from the denatured protein than from the native conformation, and water distribution has no significant effect on these changes at low osmolyte concentrations.

Citing Articles

Trimethylamine-N-oxide depletes urea in a peptide solvation shell.

Nasralla M, Laurent H, Alderman O, Headen T, Dougan L Proc Natl Acad Sci U S A. 2024; 121(14):e2317825121.

PMID: 38536756 PMC: 10998561. DOI: 10.1073/pnas.2317825121.


In Silico and In Vitro Studies of Antibacterial Activity of Cow Urine Distillate (CUD).

Pant L, Thapa S, Dahal B, Khadka R, Biradar M Evid Based Complement Alternat Med. 2024; 2024:1904763.

PMID: 38225974 PMC: 10789515. DOI: 10.1155/2024/1904763.


The ability of trimethylamine N-oxide to resist pressure induced perturbations to water structure.

Laurent H, Youngs T, Headen T, Soper A, Dougan L Commun Chem. 2023; 5(1):116.

PMID: 36697784 PMC: 9814673. DOI: 10.1038/s42004-022-00726-z.

References
1.
Picard A, Daniel I . Pressure as an environmental parameter for microbial life--a review. Biophys Chem. 2013; 183:30-41. DOI: 10.1016/j.bpc.2013.06.019. View

2.
Royer C . Revisiting volume changes in pressure-induced protein unfolding. Biochim Biophys Acta. 2002; 1595(1-2):201-9. DOI: 10.1016/s0167-4838(01)00344-2. View

3.
Tanford C . Protein denaturation. C. Theoretical models for the mechanism of denaturation. Adv Protein Chem. 1970; 24:1-95. View

4.
Pierce V, Kang M, Aburi M, Weerasinghe S, Smith P . Recent applications of Kirkwood-Buff theory to biological systems. Cell Biochem Biophys. 2007; 50(1):1-22. PMC: 2566781. DOI: 10.1007/s12013-007-9005-0. View

5.
Anjum F, Rishi V, Ahmad F . Compatibility of osmolytes with Gibbs energy of stabilization of proteins. Biochim Biophys Acta. 1999; 1476(1):75-84. DOI: 10.1016/s0167-4838(99)00215-0. View