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The 5' Untranslated Region of Potato SBgLR Gene Contributes to Pollen-specific Expression

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Journal Planta
Specialty Biology
Date 2017 Apr 27
PMID 28444448
Citations 4
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Abstract

The 5'UTR of SBgLR enhances gene expression by regulating both its transcription and translation. SBgLR (Solanum tuberosum genomic lysine rich) is a pollen-specific gene in Solanum tuberosum that encodes a microtubule-associated protein. The region from -85 to +180 (transcription start site at +1) was determined to be critical for specific expression in pollen grains. Transient and stable expression assays showed that the 5'UTR (from +1 to +184) enhanced gene expression in all detected tissues of transgenic tobacco. Deletion analysis demonstrated that the secondary structure of the 5'UTR had no effect on pollen-specific SBgLR expression, while the region from +31 to +60 was crucial. Further investigation indicated that mRNA expression was slightly decreased when the +31 to +60 region was deleted, but the mRNA decay rate remained unchanged. Mutation analysis also confirmed that the pollen-specific element TTTCT, located at +37, played an important role in pollen-specific expression. Using yeast one-hybrid screening, we isolated a DNA-binding with one finger (Dof) protein gene (StDof23) and an AT-hook motif nuclear-localized (AHL) protein gene (StAHL) from potato pollen. Further investigation indicated that StDof23 interacted with and positively regulated the +31 to +60 region; moreover, StAHL interacted with and negatively regulated the -49 to +60 region. These results demonstrate that the 5'UTR not only enhanced gene expression but also altered the tissue-specific expression pattern by regulating both transcription and translation.

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References
1.
Xiao G, Zhang Z, Yin C, Liu R, Wu X, Tan T . Characterization of the promoter and 5'-UTR intron of oleic acid desaturase (FAD2) gene in Brassica napus. Gene. 2014; 545(1):45-55. DOI: 10.1016/j.gene.2014.05.008. View

2.
Sato K, Hamada M, Asai K, Mituyama T . CENTROIDFOLD: a web server for RNA secondary structure prediction. Nucleic Acids Res. 2009; 37(Web Server issue):W277-80. PMC: 2703931. DOI: 10.1093/nar/gkp367. View

3.
Noguero M, Atif R, Ochatt S, Thompson R . The role of the DNA-binding One Zinc Finger (DOF) transcription factor family in plants. Plant Sci. 2013; 209:32-45. DOI: 10.1016/j.plantsci.2013.03.016. View

4.
Gupta V, Khurana R, Tyagi A . Promoters of two anther-specific genes confer organ-specific gene expression in a stage-specific manner in transgenic systems. Plant Cell Rep. 2007; 26(11):1919-31. DOI: 10.1007/s00299-007-0414-8. View

5.
Zheng H, Lin S, Zhang Q, Lei Y, Zhang Z . Functional analysis of 5' untranslated region of a TIR-NBS-encoding gene from triploid white poplar. Mol Genet Genomics. 2009; 282(4):381-94. DOI: 10.1007/s00438-009-0471-5. View