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Architecture of a Transcribing-translating Expressome

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Journal Science
Specialty Science
Date 2017 Apr 15
PMID 28408604
Citations 95
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Abstract

DNA transcription is functionally coupled to messenger RNA (mRNA) translation in bacteria, but how this is achieved remains unclear. Here we show that RNA polymerase (RNAP) and the ribosome of can form a defined transcribing and translating "expressome" complex. The cryo-electron microscopic structure of the expressome reveals continuous protection of ~30 nucleotides of mRNA extending from the RNAP active center to the ribosome decoding center. The RNAP-ribosome interface includes the RNAP subunit α carboxyl-terminal domain, which is required for RNAP-ribosome interaction in vitro and for pronounced cell growth defects upon translation inhibition in vivo, consistent with its function in transcription-translation coupling. The expressome structure can only form during transcription elongation and explains how translation can prevent transcriptional pausing, backtracking, and termination.

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References
1.
Zhang G, Campbell E, Minakhin L, Richter C, Severinov K, Darst S . Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution. Cell. 1999; 98(6):811-24. DOI: 10.1016/s0092-8674(00)81515-9. View

2.
Yang Y, Darbari V, Zhang N, Lu D, Glyde R, Wang Y . TRANSCRIPTION. Structures of the RNA polymerase-σ54 reveal new and conserved regulatory strategies. Science. 2015; 349(6250):882-5. PMC: 4681505. DOI: 10.1126/science.aab1478. View

3.
Murakami K, Darst S . Bacterial RNA polymerases: the wholo story. Curr Opin Struct Biol. 2003; 13(1):31-9. DOI: 10.1016/s0959-440x(02)00005-2. View

4.
Deeng J, Chan K, van der Sluis E, Berninghausen O, Han W, Gumbart J . Dynamic Behavior of Trigger Factor on the Ribosome. J Mol Biol. 2016; 428(18):3588-602. DOI: 10.1016/j.jmb.2016.06.007. View

5.
Schweimer K, Prasch S, Sujatha P, Bubunenko M, Gottesman M, Rosch P . NusA interaction with the α subunit of E. coli RNA polymerase is via the UP element site and releases autoinhibition. Structure. 2011; 19(7):945-54. PMC: 3134791. DOI: 10.1016/j.str.2011.03.024. View