» Articles » PMID: 28396582

A Pair of Maternal Chromosomes Derived from Meiotic Nondisjunction in Trisomy 21 Affects Nuclear Architecture and Transcriptional Regulation

Overview
Journal Sci Rep
Specialty Science
Date 2017 Apr 12
PMID 28396582
Citations 12
Authors
Affiliations
Soon will be listed here.
Abstract

Eukaryotic genomes are organised into complex higher-order structures within the nucleus, and the three-dimensional arrangement of chromosomes is functionally important for global gene regulation. The existence of supernumerary chromosome 21 in Down syndrome may perturb the nuclear architecture at different levels, which is normally optimised to maintain the physiological balance of gene expression. However, it has not been clearly elucidated whether and how aberrant configuration of chromosomes affects gene activities. To investigate the effects of trisomy 21 on nuclear organisation and gene expression, we performed three-dimensional fluorescent imaging analysis of chromosome-edited human induced pluripotent stem cells (iPSCs), which enabled identification of the parental origin of the three copies of chromosome 21. We found that two copies of maternal chromosomes resulting from meiotic nondisjunction had a higher tendency to form an adjacent pair and were located relatively distant from the nuclear membrane, suggesting the conserved interaction between these homologous chromosomes. Transcriptional profiling of parental-origin-specific corrected disomy 21 iPSC lines indicated upregulated expression of the maternal alleles for a group of genes, which was accompanied by a fluctuating expression pattern. These results suggest the unique effects of a pair of maternal chromosomes in trisomy 21, which may contribute to the pathological phenotype.

Citing Articles

Trisomic rescue via allele-specific multiple chromosome cleavage using CRISPR-Cas9 in trisomy 21 cells.

Hashizume R, Wakita S, Sawada H, Takebayashi S, Kitabatake Y, Miyagawa Y PNAS Nexus. 2025; 4(2):pgaf022.

PMID: 39967679 PMC: 11832276. DOI: 10.1093/pnasnexus/pgaf022.


Consequences of trisomy 21 for brain development in Down syndrome.

Russo M, Sousa A, Bhattacharyya A Nat Rev Neurosci. 2024; 25(11):740-755.

PMID: 39379691 PMC: 11834940. DOI: 10.1038/s41583-024-00866-2.


The effect of trisomic chromosomes on spatial genome organization and global transcription in embryonic stem cells.

Li M, Yang J, Xiao R, Liu Y, Hu J, Li T Cell Prolif. 2024; 57(8):e13639.

PMID: 38553796 PMC: 11294443. DOI: 10.1111/cpr.13639.


Isogenic pairs of induced-pluripotent stem-derived endothelial cells identify DYRK1A/PPARG/EGR1 pathway is responsible for Down syndrome-associated pulmonary hypertension.

Suginobe H, Ishida H, Ishii Y, Ueda K, Yoshihara C, Ueyama A Hum Mol Genet. 2023; 33(1):78-90.

PMID: 37792788 PMC: 10729858. DOI: 10.1093/hmg/ddad162.


Dissection of a Down syndrome-associated trisomy to separate the gene dosage-dependent and -independent effects of an extra chromosome.

Xing Z, Li Y, Cortes-Gomez E, Jiang X, Gao S, Pao A Hum Mol Genet. 2023; 32(13):2205-2218.

PMID: 37014740 PMC: 10281752. DOI: 10.1093/hmg/ddad056.


References
1.
Joyce E, Erceg J, Wu C . Pairing and anti-pairing: a balancing act in the diploid genome. Curr Opin Genet Dev. 2016; 37:119-128. PMC: 4939289. DOI: 10.1016/j.gde.2016.03.002. View

2.
Eckersley-Maslin M, Spector D . Random monoallelic expression: regulating gene expression one allele at a time. Trends Genet. 2014; 30(6):237-44. PMC: 4037383. DOI: 10.1016/j.tig.2014.03.003. View

3.
Marella N, Bhattacharya S, Mukherjee L, Xu J, Berezney R . Cell type specific chromosome territory organization in the interphase nucleus of normal and cancer cells. J Cell Physiol. 2009; 221(1):130-8. DOI: 10.1002/jcp.21836. View

4.
Finlan L, Sproul D, Thomson I, Boyle S, Kerr E, Perry P . Recruitment to the nuclear periphery can alter expression of genes in human cells. PLoS Genet. 2008; 4(3):e1000039. PMC: 2265557. DOI: 10.1371/journal.pgen.1000039. View

5.
Rao S, Huntley M, Durand N, Stamenova E, Bochkov I, Robinson J . A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping. Cell. 2014; 159(7):1665-80. PMC: 5635824. DOI: 10.1016/j.cell.2014.11.021. View