Development of 44 Novel Polymorphic SSR Markers for Determination of Shiitake Mushroom (Lentinula Edodes) Cultivars

Overview

Journal Genes (Basel)

Publisher MDPI

Date 2017 Mar 25

PMID 28338645

Citations 13

Authors

Hwa-Yong Lee

Suyun Moon

Donghwan Shim

Chang Pyo Hong

Yi Lee

Chang-Duck Koo

Jong-Wook Chung

Hojin Ryu

Affiliations

Soon will be listed here.

Abstract

The shiitake mushroom () is one of the most popular edible mushrooms in the world and has attracted attention for its value in medicinal and pharmacological uses. With recent advanced research and techniques, the agricultural cultivation of the shiitake mushroom has been greatly increased, especially in East Asia. Additionally, demand for the development of new cultivars with good agricultural traits has been greatly enhanced, but the development processes are complicated and more challenging than for other edible mushrooms. In this study, we developed 44 novel polymorphic simple sequence repeat (SSR) markers for the determination of shiitake mushroom cultivars based on a whole genome sequencing database of . These markers were found to be polymorphic and reliable when screened in 23 shiitake mushroom cultivars. For the 44 SSR markers developed in this study, the major allele frequency ranged from 0.13 to 0.94; the number of genotypes and number of alleles were each 2-11; the observed and expected heterozygosity were 0.00-1.00 and 0.10-0.90, respectively; and the polymorphic information content value ranged from 0.10 to 0.89. These new markers can be used for molecular breeding, the determination of cultivars, and other applications.

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