Conserved Organization of the Human and Murine T-cell Receptor Beta-gene Families
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Generation of an immune response depends on the interaction of haematopoietic cell types, among which T cells and their receptors are of central importance. The T-cell receptor is a heterodimer consisting of disulphide-linked alpha and beta-chains, each chain divided into variable (V) and constant (C) regions. The beta-chain is encoded by the rearrangement of separate variable (V beta), diversity (D beta) and joining (J beta) gene segments during T-cell differentiation. To examine the mechanisms of somatic DNA rearrangement and evolution of the beta-gene segments, we have constructed a physical map of the human T-cell receptor beta-chain family containing 40 V beta gene segments as well as both C beta gene clusters. A comparison of the published nucleotide sequences of human and murine V beta gene segments reveals 12 examples of gene segments sharing 65% or more interspecies homology. The relative order of these human and murine V beta gene segment homologues is also conserved along the chromosome, apart from more extensive human gene duplication, presumably as a consequence of constraints imposed on evolutionary mechanisms operating to diversify these gene families or of selective pressures operating to maintain order.
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PMID: 25408163 PMC: 4289303. DOI: 10.1186/1471-2164-15-994.
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Connelley T, Aerts J, Law A, Morrison W BMC Genomics. 2009; 10:192.
PMID: 19393068 PMC: 2685407. DOI: 10.1186/1471-2164-10-192.
Houston E, Connelley T, Parsons K, MacHugh N, Morrison W Immunogenetics. 2005; 57(9):674-81.
PMID: 16187058 DOI: 10.1007/s00251-005-0040-y.
Sequence variation and linkage disequilibrium in the human T-cell receptor beta (TCRB) locus.
Subrahmanyan L, Eberle M, Clark A, Kruglyak L, Nickerson D Am J Hum Genet. 2001; 69(2):381-95.
PMID: 11438886 PMC: 1235310. DOI: 10.1086/321297.
Ito K, Bian H, Molina M, Han J, Magram J, Saar E J Exp Med. 1996; 183(6):2635-44.
PMID: 8676084 PMC: 2192625. DOI: 10.1084/jem.183.6.2635.