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, a Transcriptionally Active Ty1/Copia-Like Retrotransposon Has Colonized the Genome of Through Horizontal Transfer

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Journal Front Plant Sci
Date 2017 Feb 9
PMID 28174588
Citations 3
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Abstract

Long terminal repeat (LTR) retrotransposons constitute the majority of the content of angiosperm genomes, but their evolutionary dynamics remain poorly understood. Here, we report the isolation and characterization of a putative full-length (~9550 bp) Ty1/-like retrotransposon in and its evolution in Euphorbiaceae. The so-called is phylogenetically closely related to from , and has proliferated recently (~7.19 Mya) in the genome. An RT-PCR analysis revealed substantial transcription of in all examined organs (leaves, staminate flowers, pistillate flowers, seeds, and roots) in unstressed plants and indications of elevated expression under stress. We conducted sequence analyses of 256 RT-RH fragments (~860 bp) of from 34 species representing four subfamilies of Euphorbiaceae that exist in China. copies from two species and showed incongruent phylogeny with the host species and exhibited high sequence similarity to the host genes, suggesting a horizontal transfer from to the common ancestor of . However, SSAP analysis detected no new insertions of among full-sibling progeny plants of , despite considerable SSAP polymorphisms among half-siblings. is the first transcriptionally active Ty1/-like retrotransposon isolated from . Our results provide empirical evidence of the horizontal transfer of LTR retrotransposons in plants, and may suggest a significant role of post-transcriptional host control in the life cycles of transposable elements.

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and : two transcriptionally active LTR retrotransposon subfamilies with a specific LTR structure and horizontal transfer in four Rosaceae species.

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