Exon Shuffling and Origin of Scorpion Venom Biodiversity
Overview
Authors
Affiliations
Scorpion venom is a complex combinatorial library of peptides and proteins with multiple biological functions. A combination of transcriptomic and proteomic techniques has revealed its enormous molecular diversity, as identified by the presence of a large number of ion channel-targeted neurotoxins with different folds, membrane-active antimicrobial peptides, proteases, and protease inhibitors. Although the biodiversity of scorpion venom has long been known, how it arises remains unsolved. In this work, we analyzed the exon-intron structures of an array of scorpion venom protein-encoding genes and unexpectedly found that nearly all of these genes possess a phase-1 intron (one intron located between the first and second nucleotides of a codon) near the cleavage site of a signal sequence despite their mature peptides remarkably differ. This observation matches a theory of exon shuffling in the origin of new genes and suggests that recruitment of different folds into scorpion venom might be achieved via shuffling between body protein-coding genes and ancestral venom gland-specific genes that presumably contributed tissue-specific regulatory elements and secretory signal sequences.
Optimizing Scorpion Toxin Processing through Artificial Intelligence.
Psenicnik A, Ojanguren-Affilastro A, Graham M, Hassan M, Abdel-Rahman M, Sharma P Toxins (Basel). 2024; 16(10).
PMID: 39453213 PMC: 11511117. DOI: 10.3390/toxins16100437.
A toxin-based approach to neuropeptide and peptide hormone discovery.
Koch T, Torres J, Baskin R, Florez Salcedo P, Chase K, Olivera B Front Mol Neurosci. 2023; 16:1176662.
PMID: 37720554 PMC: 10501145. DOI: 10.3389/fnmol.2023.1176662.
Improved RAD51 binders through motif shuffling based on the modularity of BRC repeats.
Lindenburg L, Pantelejevs T, Gielen F, Zuazua-Villar P, Butz M, Rees E Proc Natl Acad Sci U S A. 2021; 118(46).
PMID: 34772801 PMC: 8727024. DOI: 10.1073/pnas.2017708118.
Armed stem to stinger: a review of the ecological roles of scorpion weapons.
Simone Y, van der Meijden A J Venom Anim Toxins Incl Trop Dis. 2021; 27:e20210002.
PMID: 34527038 PMC: 8425188. DOI: 10.1590/1678-9199-JVATITD-2021-0002.
Big Genes, Small Effectors: Pea Aphid Cassette Effector Families Composed From Miniature Exons.
Dommel M, Oh J, Huguet-Tapia J, Guy E, Boulain H, Sugio A Front Plant Sci. 2020; 11:1230.
PMID: 33013944 PMC: 7495047. DOI: 10.3389/fpls.2020.01230.