Synthetic Transitions: Towards a New Synthesis
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The evolution of life in our biosphere has been marked by several major innovations. Such major complexity shifts include the origin of cells, genetic codes or multicellularity to the emergence of non-genetic information, language or even consciousness. Understanding the nature and conditions for their rise and success is a major challenge for evolutionary biology. Along with data analysis, phylogenetic studies and dedicated experimental work, theoretical and computational studies are an essential part of this exploration. With the rise of synthetic biology, evolutionary robotics, artificial life and advanced simulations, novel perspectives to these problems have led to a rather interesting scenario, where not only the major transitions can be studied or even reproduced, but even new ones might be potentially identified. In both cases, transitions can be understood in terms of phase transitions, as defined in physics. Such mapping (if correct) would help in defining a general framework to establish a theory of major transitions, both natural and artificial. Here, we review some advances made at the crossroads between statistical physics, artificial life, synthetic biology and evolutionary robotics.This article is part of the themed issue 'The major synthetic evolutionary transitions'.
Open problems in synthetic multicellularity.
Sole R, Conde-Pueyo N, Pla-Mauri J, Garcia-Ojalvo J, Montserrat N, Levin M NPJ Syst Biol Appl. 2024; 10(1):151.
PMID: 39741147 PMC: 11688451. DOI: 10.1038/s41540-024-00477-8.
Synthetic Ecosystems: From the Test Tube to the Biosphere.
Sole R, Maull V, Amor D, Mauri J, Nuria C ACS Synth Biol. 2024; 13(12):3812-3826.
PMID: 39570594 PMC: 11669164. DOI: 10.1021/acssynbio.4c00384.
Cooperative control of environmental extremes by artificial intelligent agents.
Sanchez-Fibla M, Moulin-Frier C, Sole R J R Soc Interface. 2024; 21(220):20240344.
PMID: 39501770 PMC: 11538903. DOI: 10.1098/rsif.2024.0344.
The Morphospace of Consciousness: Three Kinds of Complexity for Minds and Machines.
Arsiwalla X, Sole R, Moulin-Frier C, Herreros I, Sanchez-Fibla M, Verschure P NeuroSci. 2024; 4(2):79-102.
PMID: 39483317 PMC: 11523714. DOI: 10.3390/neurosci4020009.
Fundamental constraints to the logic of living systems.
Sole R, Kempes C, Corominas-Murtra B, De Domenico M, Kolchinsky A, Lachmann M Interface Focus. 2024; 14(5):20240010.
PMID: 39464646 PMC: 11503024. DOI: 10.1098/rsfs.2024.0010.