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Characterization of Aspartate Kinase from Corynebacterium Pekinense and the Critical Site of Arg169

Overview
Journal Int J Mol Sci
Publisher MDPI
Date 2015 Dec 4
PMID 26633359
Citations 3
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Abstract

Aspartate kinase (AK) is the key enzyme in the biosynthesis of aspartate-derived amino acids. Recombinant AK was efficiently purified and systematically characterized through analysis under optimal conditions combined with steady-state kinetics study. Homogeneous AK was predicted as a decamer with a molecular weight of ~48 kDa and a half-life of 4.5 h. The enzymatic activity was enhanced by ethanol and Ni(2+). Moreover, steady-state kinetic study confirmed that AK is an allosteric enzyme, and its activity was inhibited by allosteric inhibitors, such as Lys, Met, and Thr. Theoretical results indicated the binding mode of AK and showed that Arg169 is an important residue in substrate binding, catalytic domain, and inhibitor binding. The values of the kinetic parameter Vmax of R169 mutants, namely, R169Y, R169P, R169D, and R169H AK, with l-aspartate as the substrate, were 4.71-, 2.25-, 2.57-, and 2.13-fold higher, respectively, than that of the wild-type AK. Furthermore, experimental and theoretical data showed that Arg169 formed a hydrogen bond with Glu92, which functions as the entrance gate. This study provides a basis to develop new enzymes and elucidate the corresponding amino acid production.

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References
1.
Kobashi N, Nishiyama M, Tanokura M . Aspartate kinase-independent lysine synthesis in an extremely thermophilic bacterium, Thermus thermophilus: lysine is synthesized via alpha-aminoadipic acid not via diaminopimelic acid. J Bacteriol. 1999; 181(6):1713-8. PMC: 93567. DOI: 10.1128/JB.181.6.1713-1718.1999. View

2.
Mas-Droux C, Curien G, Robert-Genthon M, Laurencin M, Ferrer J, Dumas R . A novel organization of ACT domains in allosteric enzymes revealed by the crystal structure of Arabidopsis aspartate kinase. Plant Cell. 2006; 18(7):1681-92. PMC: 1488909. DOI: 10.1105/tpc.105.040451. View

3.
Nishida H, Narumi I . Phylogenetic and disruption analyses of aspartate kinase of Deinococcus radiodurans. Biosci Biotechnol Biochem. 2007; 71(4):1015-20. DOI: 10.1271/bbb.60671. View

4.
Kiefer F, Arnold K, Kunzli M, Bordoli L, Schwede T . The SWISS-MODEL Repository and associated resources. Nucleic Acids Res. 2008; 37(Database issue):D387-92. PMC: 2686475. DOI: 10.1093/nar/gkn750. View

5.
Schultz C, Niebisch A, Schwaiger A, Viets U, Metzger S, Bramkamp M . Genetic and biochemical analysis of the serine/threonine protein kinases PknA, PknB, PknG and PknL of Corynebacterium glutamicum: evidence for non-essentiality and for phosphorylation of OdhI and FtsZ by multiple kinases. Mol Microbiol. 2009; 74(3):724-41. PMC: 2784874. DOI: 10.1111/j.1365-2958.2009.06897.x. View