» Articles » PMID: 26417087

NhaA Antiporter Functions Using 10 Helices, and an Additional 2 Contribute to Assembly/stability

Overview
Specialty Science
Date 2015 Sep 30
PMID 26417087
Citations 10
Authors
Affiliations
Soon will be listed here.
Abstract

The Escherichia coli Na(+)/H(+) antiporter (Ec-NhaA) is the best-characterized of all pH-regulated Na(+)/H(+) exchangers that control cellular Na(+) and H(+) homeostasis. Ec-NhaA has 12 helices, 2 of which (VI and VII) are absent from other antiporters that share the Ec-NhaA structural fold. This α-hairpin is located in the dimer interface of the Ec-NhaA homodimer together with a β-sheet. Here we examine computationally and experimentally the role of the α-hairpin in the stability, dimerization, transport, and pH regulation of Ec-NhaA. Evolutionary analysis (ConSurf) indicates that the VI-VII helical hairpin is much less conserved than the remaining transmembrane region. Moreover, normal mode analysis also shows that intact NhaA and a variant, deleted of the α-hairpin, share similar dynamics, suggesting that the structure may be dispensable. Thus, two truncated Ec-NhaA mutants were constructed, one deleted of the α-hairpin and another also lacking the β-sheet. The mutants were studied at physiological pH in the membrane and in detergent micelles. The findings demonstrate that the truncated mutants retain significant activity and regulatory properties but are defective in the assembly/stability of the Ec-NhaA dimer.

Citing Articles

Prokaryotic Na/H Exchangers-Transport Mechanism and Essential Residues.

Patino-Ruiz M, Ganea C, Calinescu O Int J Mol Sci. 2022; 23(16).

PMID: 36012428 PMC: 9408914. DOI: 10.3390/ijms23169156.


Continuous Constant pH Molecular Dynamics Simulations of Transmembrane Proteins.

Huang Y, Henderson J, Shen J Methods Mol Biol. 2021; 2302:275-287.

PMID: 33877633 PMC: 8062021. DOI: 10.1007/978-1-0716-1394-8_15.


Insight into the direct interaction of Na with NhaA and mechanistic implications.

Quick M, Dwivedi M, Padan E Sci Rep. 2021; 11(1):7045.

PMID: 33782459 PMC: 8007835. DOI: 10.1038/s41598-021-86318-8.


Mechanism of TonB-dependent transport system in Halomonas alkalicola CICC 11012s in response to alkaline stress.

Zhai L, Xie J, Feng H, Sun S, Cheng K, Yao S Extremophiles. 2020; 25(1):39-49.

PMID: 33123748 DOI: 10.1007/s00792-020-01209-6.


Ion Binding and Selectivity of the Na/H Antiporter MjNhaP1 from Experiment and Simulation.

Warnau J, Wohlert D, Okazaki K, Yildiz O, Gamiz-Hernandez A, Kaila V J Phys Chem B. 2019; 124(2):336-344.

PMID: 31841344 PMC: 6970264. DOI: 10.1021/acs.jpcb.9b08552.


References
1.
Lescat M, Reibel F, Pintard C, Dion S, Glodt J, Gateau C . The conserved nhaAR operon is drastically divergent between B2 and non-B2 Escherichia coli and is involved in extra-intestinal virulence. PLoS One. 2014; 9(9):e108738. PMC: 4182557. DOI: 10.1371/journal.pone.0108738. View

2.
Lee C, Yashiro S, Dotson D, Uzdavinys P, Iwata S, Sansom M . Crystal structure of the sodium-proton antiporter NhaA dimer and new mechanistic insights. J Gen Physiol. 2014; 144(6):529-44. PMC: 4242812. DOI: 10.1085/jgp.201411219. View

3.
Wohlert D, Kuhlbrandt W, Yildiz O . Structure and substrate ion binding in the sodium/proton antiporter PaNhaP. Elife. 2014; 3:e03579. PMC: 4381880. DOI: 10.7554/eLife.03579. View

4.
Paulino C, Wohlert D, Kapotova E, Yildiz O, Kuhlbrandt W . Structure and transport mechanism of the sodium/proton antiporter MjNhaP1. Elife. 2014; 3:e03583. PMC: 4381896. DOI: 10.7554/eLife.03583. View

5.
Gerchman Y, Rimon A, Venturi M, Padan E . Oligomerization of NhaA, the Na+/H+ antiporter of Escherichia coli in the membrane and its functional and structural consequences. Biochemistry. 2001; 40(11):3403-12. DOI: 10.1021/bi002669o. View