» Articles » PMID: 26305418

A Compendium of DIS3 Mutations and Associated Transcriptional Signatures in Plasma Cell Dyscrasias

Overview
Journal Oncotarget
Specialty Oncology
Date 2015 Aug 26
PMID 26305418
Citations 27
Authors
Affiliations
Soon will be listed here.
Abstract

DIS3 is a catalytic subunit of the human exosome complex, containing exonucleolytic (RNB) and endonucleolytic (PIN) domains, recently found mutated in multiple myeloma (MM), a clinically and genetically heterogeneous form of plasma cell (PC) dyscrasia. We analyzed by next-generation sequencing (NGS) the DIS3 PIN and RNB domains in purified bone marrow PCs from 164 representative patients, including 130 cases with MM, 24 with primary PC leukemia and 10 with secondary PC leukemia. DIS3 mutations were found respectively in 18.5%, 25% and 30% of cases. Identified variants were predominantly missense mutations localized in the RNB domain, and were often detected at low allele frequency. DIS3 mutations were preferentially carried by IGH-translocated/nonhyperdiploid patients. Sequential analysis at diagnosis and relapse in a subset of cases highlighted some instances of increasing DIS3 mutation burden during disease progression. NGS also revealed that the majority of DIS3 variants in mutated cases were comparably detectable at transcriptional level. Furthermore, gene expression profiling analysis in DIS3-mutated patients identified a transcriptional signature suggestive for impaired RNA exosome function. In conclusion, these data further support the pathological relevance of DIS3 mutations in plasma cell dyscrasias and suggest that DIS3 may represent a potential tumor suppressor gene in such disorders.

Citing Articles

Selection on synonymous sites: the unwanted transcript hypothesis.

Radrizzani S, Kudla G, Izsvak Z, Hurst L Nat Rev Genet. 2024; 25(6):431-448.

PMID: 38297070 DOI: 10.1038/s41576-023-00686-7.


RNA processing mechanisms contribute to genome organization and stability in B cells.

Miglierina E, Ordanoska D, Le Noir S, Laffleur B Oncogene. 2024; 43(9):615-623.

PMID: 38287115 PMC: 10890934. DOI: 10.1038/s41388-024-02952-2.


pyComBat, a Python tool for batch effects correction in high-throughput molecular data using empirical Bayes methods.

Behdenna A, Colange M, Haziza J, Gema A, Appe G, Azencott C BMC Bioinformatics. 2023; 24(1):459.

PMID: 38057718 PMC: 10701943. DOI: 10.1186/s12859-023-05578-5.


depletion in multiple myeloma causes extensive perturbation in cell cycle progression and centrosome amplification.

Favasuli V, Ronchetti D, Silvestris I, Puccio N, Fabbiano G, Traini V Haematologica. 2023; 109(1):231-244.

PMID: 37439377 PMC: 10772536. DOI: 10.3324/haematol.2023.283274.


: The Enigmatic Gene in Multiple Myeloma.

Ohguchi Y, Ohguchi H Int J Mol Sci. 2023; 24(4).

PMID: 36835493 PMC: 9958658. DOI: 10.3390/ijms24044079.


References
1.
. Criteria for the classification of monoclonal gammopathies, multiple myeloma and related disorders: a report of the International Myeloma Working Group. Br J Haematol. 2003; 121(5):749-57. View

2.
Lionetti M, Fabris S, Cutrona G, Agnelli L, Ciardullo C, Matis S . High-throughput sequencing for the identification of NOTCH1 mutations in early stage chronic lymphocytic leukaemia: biological and clinical implications. Br J Haematol. 2014; 165(5):629-39. DOI: 10.1111/bjh.12800. View

3.
Keats J, Chesi M, Egan J, Garbitt V, Palmer S, Braggio E . Clonal competition with alternating dominance in multiple myeloma. Blood. 2012; 120(5):1067-76. PMC: 3412330. DOI: 10.1182/blood-2012-01-405985. View

4.
Segalla S, Pivetti S, Todoerti K, Chudzik M, Giuliani E, Lazzaro F . The ribonuclease DIS3 promotes let-7 miRNA maturation by degrading the pluripotency factor LIN28B mRNA. Nucleic Acids Res. 2015; 43(10):5182-93. PMC: 4446438. DOI: 10.1093/nar/gkv387. View

5.
Lorentzen E, Basquin J, Tomecki R, Dziembowski A, Conti E . Structure of the active subunit of the yeast exosome core, Rrp44: diverse modes of substrate recruitment in the RNase II nuclease family. Mol Cell. 2008; 29(6):717-28. DOI: 10.1016/j.molcel.2008.02.018. View