» Articles » PMID: 25958855

HIV-1 Drug Discovery: Targeting Folded RNA Structures with Branched Peptides

Overview
Journal Org Biomol Chem
Specialties Biochemistry
Chemistry
Date 2015 May 12
PMID 25958855
Citations 3
Authors
Affiliations
Soon will be listed here.
Abstract

Human immunodeficiency virus type 1 (HIV-1) is an RNA virus that is prone to high rates of mutation. While the disease is managed with current antiretroviral therapies, drugs with a new mode of action are needed. A strategy towards this goal is aimed at targeting the native three-dimensional fold of conserved RNA structures. This perspective highlights medium-sized peptides and peptidomimetics used to target two conserved RNA structures of HIV-1. In particular, branched peptides have the capacity to bind in a multivalent fashion, utilizing a large surface area to achieve the necessary affinity and selectivity toward the target RNA.

Citing Articles

Nuclease-like metalloscissors: Biomimetic candidates for cancer and bacterial and viral infections therapy.

Anjomshoa M, Amirheidari B Coord Chem Rev. 2022; 458:214417.

PMID: 35153301 PMC: 8816526. DOI: 10.1016/j.ccr.2022.214417.


Molecular recognition of a branched peptide with HIV-1 Rev Response Element (RRE) RNA.

Dai Y, Peralta A, Wynn J, Sherpa C, Li H, Verma A Bioorg Med Chem. 2019; 27(8):1759-1765.

PMID: 30879859 PMC: 6476629. DOI: 10.1016/j.bmc.2019.03.016.


Bridgehead-Substituted Triptycenes for Discovery of Nucleic Acid Junction Binders.

Barros S, Yoon I, Suh S, Chenoweth D Org Lett. 2016; 18(10):2423-6.

PMID: 27172288 PMC: 5107256. DOI: 10.1021/acs.orglett.6b00945.

References
1.
Kinder D, Katzenellenbogen J . Acylamino boronic acids and difluoroborane analogues of amino acids: potent inhibitors of chymotrypsin and elastase. J Med Chem. 1985; 28(12):1917-25. DOI: 10.1021/jm00150a027. View

2.
Wilson D, Harms J, Nierhaus K, Schlunzen F, Fucini P . Species-specific antibiotic-ribosome interactions: implications for drug development. Biol Chem. 2005; 386(12):1239-52. DOI: 10.1515/BC.2005.141. View

3.
Robertson D, Hahn B, Sharp P . Recombination in AIDS viruses. J Mol Evol. 1995; 40(3):249-59. DOI: 10.1007/BF00163230. View

4.
Zhang W, Bryson D, Crumpton J, Wynn J, Santos W . Targeting folded RNA: a branched peptide boronic acid that binds to a large surface area of HIV-1 RRE RNA. Org Biomol Chem. 2013; 11(37):6263-71. PMC: 3821739. DOI: 10.1039/c3ob41053f. View

5.
Thomas J, Hergenrother P . Targeting RNA with small molecules. Chem Rev. 2008; 108(4):1171-224. DOI: 10.1021/cr0681546. View