» Articles » PMID: 25101779

Snow Surface Microbiome on the High Antarctic Plateau (DOME C)

Overview
Journal PLoS One
Date 2014 Aug 8
PMID 25101779
Citations 16
Authors
Affiliations
Soon will be listed here.
Abstract

The cryosphere is an integral part of the global climate system and one of the major habitable ecosystems of Earth's biosphere. These permanently frozen environments harbor diverse, viable and metabolically active microbial populations that represent almost all the major phylogenetic groups. In this study, we investigated the microbial diversity in the surface snow surrounding the Concordia Research Station on the High Antarctic Plateau through a polyphasic approach, including direct prokaryotic quantification by flow cytometry and catalyzed reporter deposition fluorescence in situ hybridization (CARD-FISH), and phylogenetic identification by 16S RNA gene clone library sequencing and 454 16S amplicon pyrosequencing. Although the microbial abundance was low (<10(3) cells/ml of snowmelt), concordant results were obtained with the different techniques. The microbial community was mainly composed of members of the Alpha-proteobacteria class (e.g. Kiloniellaceae and Rhodobacteraceae), which is one of the most well-represented bacterial groups in marine habitats, Bacteroidetes (e.g. Cryomorphaceae and Flavobacteriaceae) and Cyanobacteria. Based on our results, polar microorganisms could not only be considered as deposited airborne particles, but as an active component of the snowpack ecology of the High Antarctic Plateau.

Citing Articles

Microbial biogeography along a 2578 km transect on the East Antarctic Plateau.

Parro V, Lezcano M, Moreno-Paz M, Davila A, Azua-Bustos A, Garcia-Villadangos M Nat Commun. 2025; 16(1):775.

PMID: 39824814 PMC: 11742046. DOI: 10.1038/s41467-025-55997-6.


Resurrected microorganisms: a plethora of resting bacteria underway for human interaction.

Amin A, Khan I, Amin M, Fatima M, Sajjad W, Shah T AMB Express. 2024; 14(1):106.

PMID: 39342060 PMC: 11438741. DOI: 10.1186/s13568-024-01750-z.


Snow viruses and their implications on red snow algal blooms.

Barno A, Green K, Rohwer F, Silveira C mSystems. 2024; 9(5):e0008324.

PMID: 38647296 PMC: 11097641. DOI: 10.1128/msystems.00083-24.


Scientific novelty beyond the experiment.

Hallsworth J, Udaondo Z, Pedros-Alio C, Hofer J, Benison K, Lloyd K Microb Biotechnol. 2023; 16(6):1131-1173.

PMID: 36786388 PMC: 10221578. DOI: 10.1111/1751-7915.14222.


Snow Surface Microbial Diversity at the Detection Limit within the Vicinity of the Concordia Station, Antarctica.

Napoli A, Coleine C, Ulrich N, Moeller R, Billi D, Selbmann L Life (Basel). 2023; 13(1).

PMID: 36676062 PMC: 9863605. DOI: 10.3390/life13010113.


References
1.
Cottrell M, Kirchman D . Natural assemblages of marine proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low- and high-molecular-weight dissolved organic matter. Appl Environ Microbiol. 2000; 66(4):1692-7. PMC: 92043. DOI: 10.1128/AEM.66.4.1692-1697.2000. View

2.
Loy A, Maixner F, Wagner M, Horn M . probeBase--an online resource for rRNA-targeted oligonucleotide probes: new features 2007. Nucleic Acids Res. 2006; 35(Database issue):D800-4. PMC: 1669758. DOI: 10.1093/nar/gkl856. View

3.
Giovannoni S, Stingl U . Molecular diversity and ecology of microbial plankton. Nature. 2005; 437(7057):343-8. DOI: 10.1038/nature04158. View

4.
Wang Q, Garrity G, Tiedje J, Cole J . Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol. 2007; 73(16):5261-7. PMC: 1950982. DOI: 10.1128/AEM.00062-07. View

5.
Tindall B . Prokaryotic diversity in the Antarctic: the tip of the iceberg. Microb Ecol. 2004; 47(3):271-83. DOI: 10.1007/s00248-003-1050-7. View