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Evaluating the Feasibility of an Agglomerative Hierarchy Clustering Algorithm for the Automatic Detection of the Arterial Input Function Using DSC-MRI

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Journal PLoS One
Date 2014 Jun 17
PMID 24932638
Citations 4
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Abstract

During dynamic susceptibility contrast-magnetic resonance imaging (DSC-MRI), it has been demonstrated that the arterial input function (AIF) can be obtained using fuzzy c-means (FCM) and k-means clustering methods. However, due to the dependence on the initial centers of clusters, both clustering methods have poor reproducibility between the calculation and recalculation steps. To address this problem, the present study developed an alternative clustering technique based on the agglomerative hierarchy (AH) method for AIF determination. The performance of AH method was evaluated using simulated data and clinical data based on comparisons with the two previously demonstrated clustering-based methods in terms of the detection accuracy, calculation reproducibility, and computational complexity. The statistical analysis demonstrated that, at the cost of a significantly longer execution time, AH method obtained AIFs more in line with the expected AIF, and it was perfectly reproducible at different time points. In our opinion, the disadvantage of AH method in terms of the execution time can be alleviated by introducing a professional high-performance workstation. The findings of this study support the feasibility of using AH clustering method for detecting the AIF automatically.

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References
1.
Kellner E, Mader I, Mix M, Splitthoff D, Reisert M, Foerster K . Arterial input function measurements for bolus tracking perfusion imaging in the brain. Magn Reson Med. 2012; 69(3):771-80. DOI: 10.1002/mrm.24319. View

2.
Shin W, Horowitz S, Ragin A, Chen Y, Walker M, Carroll T . Quantitative cerebral perfusion using dynamic susceptibility contrast MRI: evaluation of reproducibility and age- and gender-dependence with fully automatic image postprocessing algorithm. Magn Reson Med. 2007; 58(6):1232-41. DOI: 10.1002/mrm.21420. View

3.
Mlynash M, Eyngorn I, Bammer R, Moseley M, Tong D . Automated method for generating the arterial input function on perfusion-weighted MR imaging: validation in patients with stroke. AJNR Am J Neuroradiol. 2005; 26(6):1479-86. PMC: 8149072. View

4.
Smith A, Grandin C, Duprez T, Mataigne F, Cosnard G . Whole brain quantitative CBF, CBV, and MTT measurements using MRI bolus tracking: implementation and application to data acquired from hyperacute stroke patients. J Magn Reson Imaging. 2000; 12(3):400-10. DOI: 10.1002/1522-2586(200009)12:3<400::aid-jmri5>3.0.co;2-c. View

5.
Willats L, Christensen S, Ma H, Donnan G, Connelly A, Calamante F . Validating a local Arterial Input Function method for improved perfusion quantification in stroke. J Cereb Blood Flow Metab. 2011; 31(11):2189-98. PMC: 3210343. DOI: 10.1038/jcbfm.2011.78. View