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Diaminopyridine-based Potent and Selective Mps1 Kinase Inhibitors Binding to an Unusual Flipped-Peptide Conformation

Abstract

Monopolar spindle 1 (Mps1) is an attractive cancer drug target due to the important role that it plays in centrosome duplication, the spindle assembly checkpoint, and the maintenance of chromosomal stability. A design based on JNK inhibitors with an aminopyridine scaffold and subsequent modifications identified diaminopyridine 9 with an IC50 of 37 nM. The X-ray structure of 9 revealed that the Cys604 carbonyl group of the hinge region flips to form a hydrogen bond with the aniline NH group in 9. Further optimization of 9 led to 12 with improved cellular activity, suitable pharmacokinetic profiles, and good in vivo efficacy in the mouse A549 xenograft model. Moreover, 12 displayed excellent selectivity over 95 kinases, indicating the contribution of its unusual flipped-peptide conformation to its selectivity.

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References
1.
Fabian M, Biggs 3rd W, Treiber D, Atteridge C, Azimioara M, Benedetti M . A small molecule-kinase interaction map for clinical kinase inhibitors. Nat Biotechnol. 2005; 23(3):329-36. DOI: 10.1038/nbt1068. View

2.
Zuccotto F, Ardini E, Casale E, Angiolini M . Through the "gatekeeper door": exploiting the active kinase conformation. J Med Chem. 2009; 53(7):2681-94. DOI: 10.1021/jm901443h. View

3.
Chu M, Lang Z, Chavas L, Neres J, Fedorova O, Tabernero L . Biophysical and X-ray crystallographic analysis of Mps1 kinase inhibitor complexes. Biochemistry. 2010; 49(8):1689-701. DOI: 10.1021/bi901970c. View

4.
Herberich B, Cao G, Chakrabarti P, Falsey J, Pettus L, Rzasa R . Discovery of highly selective and potent p38 inhibitors based on a phthalazine scaffold. J Med Chem. 2008; 51(20):6271-9. DOI: 10.1021/jm8005417. View

5.
Chu M, Chavas L, Douglas K, Eyers P, Tabernero L . Crystal structure of the catalytic domain of the mitotic checkpoint kinase Mps1 in complex with SP600125. J Biol Chem. 2008; 283(31):21495-500. DOI: 10.1074/jbc.M803026200. View