» Articles » PMID: 24802807

Yeast Frataxin is Stabilized by Low Salt Concentrations: Cold Denaturation Disentangles Ionic Strength Effects from Specific Interactions

Overview
Journal PLoS One
Date 2014 May 8
PMID 24802807
Citations 16
Authors
Affiliations
Soon will be listed here.
Abstract

Frataxins are a family of metal binding proteins associated with the human Friedreich's ataxia disease. Here, we have addressed the effect of non-specifically binding salts on the stability of the yeast ortholog Yfh1. This protein is a sensitive model since its stability is strongly dependent on the environment, in particular on ionic strength. Yfh1 also offers the unique advantage that its cold denaturation can be observed above the freezing point of water, thus allowing the facile construction of the whole protein stability curve and hence the measurement of accurate thermodynamic parameters for unfolding. We systematically measured the effect of several cations and, as a control, of different anions. We show that, while strongly susceptible to ionic strength, as it would be in the cellular environment, Yfh1 stability is sensitive not only to divalent cations, which bind specifically, but also to monovalent cations. We pinpoint the structural bases of the stability and hypothesize that the destabilization induced by an unusual cluster of negatively charged residues favours the entrance of water molecules into the hydrophobic core, consistent with the generally accepted mechanism of cold denaturation.

Citing Articles

Probing the non-covalent forces key to the thermodynamics of β-hairpin unfolding.

Tran T, Prusty P, Ricciardi M, Travis C, Waters M, Gibb B Chem Sci. 2024; .

PMID: 39239483 PMC: 11369966. DOI: 10.1039/d4sc03464c.


Cold unfolding of heat-responsive TRPV3.

Wang G Res Sq. 2024; .

PMID: 38746116 PMC: 11092857. DOI: 10.21203/rs.3.rs-4285061/v1.


Recipes for Inducing Cold Denaturation in an Otherwise Stable Protein.

Bitonti A, Puglisi R, Meli M, Martin S, Colombo G, Temussi P J Am Chem Soc. 2022; 144(16):7198-7207.

PMID: 35427450 PMC: 9052743. DOI: 10.1021/jacs.1c13355.


Heat and cold denaturation of yeast frataxin: The effect of pressure.

Puglisi R, Cioni P, Gabellieri E, Presciuttini G, Pastore A, Temussi P Biophys J. 2022; 121(8):1502-1511.

PMID: 35278425 PMC: 9072581. DOI: 10.1016/j.bpj.2022.03.010.


The anatomy of unfolding of Yfh1 is revealed by site-specific fold stability analysis measured by 2D NMR spectroscopy.

Puglisi R, Karunanithy G, Hansen D, Pastore A, Temussi P Commun Chem. 2022; 4(1).

PMID: 35243007 PMC: 7612453. DOI: 10.1038/s42004-021-00566-3.


References
1.
Nair M, Adinolfi S, Pastore C, Kelly G, Temussi P, Pastore A . Solution structure of the bacterial frataxin ortholog, CyaY: mapping the iron binding sites. Structure. 2004; 12(11):2037-48. DOI: 10.1016/j.str.2004.08.012. View

2.
He Y, Alam S, Proteasa S, Zhang Y, Lesuisse E, Dancis A . Yeast frataxin solution structure, iron binding, and ferrochelatase interaction. Biochemistry. 2004; 43(51):16254-62. PMC: 2859087. DOI: 10.1021/bi0488193. View

3.
Zhang Y, Cremer P . Interactions between macromolecules and ions: The Hofmeister series. Curr Opin Chem Biol. 2006; 10(6):658-63. DOI: 10.1016/j.cbpa.2006.09.020. View

4.
Koradi R, Billeter M, Wuthrich K . MOLMOL: a program for display and analysis of macromolecular structures. J Mol Graph. 1996; 14(1):51-5, 29-32. DOI: 10.1016/0263-7855(96)00009-4. View

5.
Privalov P . Cold denaturation of proteins. Crit Rev Biochem Mol Biol. 1990; 25(4):281-305. DOI: 10.3109/10409239009090612. View