» Articles » PMID: 24552703

The Dharma of Nonsense-mediated MRNA Decay in Mammalian Cells

Overview
Journal Mol Cells
Publisher Elsevier
Date 2014 Feb 21
PMID 24552703
Citations 40
Authors
Affiliations
Soon will be listed here.
Abstract

Mammalian-cell messenger RNAs (mRNAs) are generated in the nucleus from precursor RNAs (pre-mRNAs, which often contain one or more introns) that are complexed with an array of incompletely inventoried proteins. During their biogenesis, pre-mRNAs and their derivative mRNAs are subject to extensive cis-modifications. These modifications promote the binding of distinct polypeptides that mediate a diverse array of functions needed for mRNA metabolism, including nuclear export, inspection by the nonsense-mediated mRNA decay (NMD) quality-control machinery, and synthesis of the encoded protein product. Ribonucleoprotein complex (RNP) remodeling through the loss and gain of protein constituents before and after pre-mRNA splicing, during mRNA export, and within the cytoplasm facilitates NMD, ensuring integrity of the transcriptome. Here we review the mRNP rearrangements that culminate in detection and elimination of faulty transcripts by mammalian-cell NMD.

Citing Articles

RNA binding proteins (RBPs) on genetic stability and diseases.

Aborode A, Abass O, Nasiru S, Eigbobo M, Nefishatu S, Idowu A Glob Med Genet. 2025; 12(1):100032.

PMID: 39925443 PMC: 11803229. DOI: 10.1016/j.gmg.2024.100032.


Technologies for Targeted RNA Degradation and Induced RNA Decay.

Mikutis S, Bernardes G Chem Rev. 2024; 124(23):13301-13330.

PMID: 39499674 PMC: 11638902. DOI: 10.1021/acs.chemrev.4c00472.


Transcriptome-wide analysis for glucocorticoid receptor-mediated mRNA decay reveals various classes of target transcripts.

Boo S, Shin M, Ha H, Woo J, Kim Y Mol Cells. 2024; 47(11):100130.

PMID: 39426683 PMC: 11577233. DOI: 10.1016/j.mocell.2024.100130.


Impact of essential genes on the success of genome editing experiments generating 3313 new genetically engineered mouse lines.

Elrick H, Peterson K, Willis B, Lanza D, Acar E, Ryder E Sci Rep. 2024; 14(1):22626.

PMID: 39349521 PMC: 11443006. DOI: 10.1038/s41598-024-72418-8.


Nonsense-mediated mRNA decay pathway in plants under stress: general gene regulatory mechanism and advances.

Luha R, Rana V, Vainstein A, Kumar V Planta. 2024; 259(3):51.

PMID: 38289504 DOI: 10.1007/s00425-023-04317-7.


References
1.
Franks T, Singh G, Lykke-Andersen J . Upf1 ATPase-dependent mRNP disassembly is required for completion of nonsense- mediated mRNA decay. Cell. 2010; 143(6):938-50. PMC: 3357093. DOI: 10.1016/j.cell.2010.11.043. View

2.
Meaux S, van Hoof A, Baker K . Nonsense-mediated mRNA decay in yeast does not require PAB1 or a poly(A) tail. Mol Cell. 2008; 29(1):134-40. PMC: 2241659. DOI: 10.1016/j.molcel.2007.10.031. View

3.
Hwang J, Sato H, Tang Y, Matsuda D, Maquat L . UPF1 association with the cap-binding protein, CBP80, promotes nonsense-mediated mRNA decay at two distinct steps. Mol Cell. 2010; 39(3):396-409. PMC: 2924619. DOI: 10.1016/j.molcel.2010.07.004. View

4.
Kashima I, Yamashita A, Izumi N, Kataoka N, Morishita R, Hoshino S . Binding of a novel SMG-1-Upf1-eRF1-eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decay. Genes Dev. 2006; 20(3):355-67. PMC: 1361706. DOI: 10.1101/gad.1389006. View

5.
Eberle A, Stalder L, Mathys H, Orozco R, Muhlemann O . Posttranscriptional gene regulation by spatial rearrangement of the 3' untranslated region. PLoS Biol. 2008; 6(4):e92. PMC: 2689704. DOI: 10.1371/journal.pbio.0060092. View