» Articles » PMID: 24495969

Follow-up of Loci from the International Genomics of Alzheimer's Disease Project Identifies TRIP4 As a Novel Susceptibility Gene

Abstract

To follow-up loci discovered by the International Genomics of Alzheimer's Disease Project, we attempted independent replication of 19 single nucleotide polymorphisms (SNPs) in a large Spanish sample (Fundació ACE data set; 1808 patients and 2564 controls). Our results corroborate association with four SNPs located in the genes INPP5D, MEF2C, ZCWPW1 and FERMT2, respectively. Of these, ZCWPW1 was the only SNP to withstand correction for multiple testing (P=0.000655). Furthermore, we identify TRIP4 (rs74615166) as a novel genome-wide significant locus for Alzheimer's disease risk (odds ratio=1.31; confidence interval 95% (1.19-1.44); P=9.74 × 10(-)(9)).

Citing Articles

Benefits and Challenges of Rare Genetic Variation in Alzheimer's Disease.

Grozeva D, Saad S, Menzies G, Sims R Curr Genet Med Rep. 2024; 7(1):53-62.

PMID: 39649954 PMC: 7617023. DOI: 10.1007/s40142-019-0161-5.


Massively parallel screen uncovers many rare 3' UTR variants regulating mRNA abundance of cancer driver genes.

Fu T, Amoah K, Chan T, Bahn J, Lee J, Terrazas S Nat Commun. 2024; 15(1):3335.

PMID: 38637555 PMC: 11026479. DOI: 10.1038/s41467-024-46795-7.


A comparative study of structural variant calling in WGS from Alzheimer's disease families.

Malamon J, Farrell J, Xia L, Dombroski B, Das R, Way J Life Sci Alliance. 2024; 7(5).

PMID: 38418088 PMC: 10902710. DOI: 10.26508/lsa.202302181.


Structure-Activity Studies on Bis-Sulfonamide SHIP1 Activators.

Meyer S, Fernandes S, Anderson R, Pacherille A, Toms B, Kerr W Molecules. 2023; 28(24).

PMID: 38138538 PMC: 10745928. DOI: 10.3390/molecules28248048.


Pathological Roles of INPP5D in Alzheimer's Disease.

Chu Y, Akahori A, Takatori S, Tomita T Adv Exp Med Biol. 2023; 1423:289-301.

PMID: 37525057 DOI: 10.1007/978-3-031-31978-5_30.


References
1.
Flajolet M, He G, Heiman M, Lin A, Nairn A, Greengard P . Regulation of Alzheimer's disease amyloid-beta formation by casein kinase I. Proc Natl Acad Sci U S A. 2007; 104(10):4159-64. PMC: 1820725. DOI: 10.1073/pnas.0611236104. View

2.
Corey-Bloom J, Galasko D, Hofstetter C, Jackson J, Thal L . Clinical features distinguishing large cohorts with possible AD, probable AD, and mixed dementia. J Am Geriatr Soc. 1993; 41(1):31-7. DOI: 10.1111/j.1532-5415.1993.tb05944.x. View

3.
Seshadri S, Fitzpatrick A, Ikram M, DeStefano A, Gudnason V, Boada M . Genome-wide analysis of genetic loci associated with Alzheimer disease. JAMA. 2010; 303(18):1832-40. PMC: 2989531. DOI: 10.1001/jama.2010.574. View

4.
Antunez C, Boada M, Gonzalez-Perez A, Gayan J, Ramirez-Lorca R, Marin J . The membrane-spanning 4-domains, subfamily A (MS4A) gene cluster contains a common variant associated with Alzheimer's disease. Genome Med. 2011; 3(5):33. PMC: 3219074. DOI: 10.1186/gm249. View

5.
Cherkasova V, Ayyadevara S, Egilmez N, Shmookler Reis R . Diverse Caenorhabditis elegans genes that are upregulated in dauer larvae also show elevated transcript levels in long-lived, aged, or starved adults. J Mol Biol. 2000; 300(3):433-48. DOI: 10.1006/jmbi.2000.3880. View