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Regulatory Roles for Long NcRNA and MRNA

Overview
Journal Cancers (Basel)
Publisher MDPI
Specialty Oncology
Date 2013 Nov 13
PMID 24216986
Citations 55
Authors
Affiliations
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Abstract

Recent advances in high-throughput sequencing technology have identified the transcription of a much larger portion of the genome than previously anticipated. Especially in the context of cancer it has become clear that aberrant transcription of both protein-coding and long non-coding RNAs (lncRNAs) are frequent events. The current dogma of RNA function describes mRNA to be responsible for the synthesis of proteins, whereas non-coding RNA can have regulatory or epigenetic functions. However, this distinction between protein coding and regulatory ability of transcripts may not be that strict. Here, we review the increasing body of evidence for the existence of multifunctional RNAs that have both protein-coding and trans-regulatory roles. Moreover, we demonstrate that coding transcripts bind to components of the Polycomb Repressor Complex 2 (PRC2) with similar affinities as non-coding transcripts, revealing potential epigenetic regulation by mRNAs. We hypothesize that studies on the regulatory ability of disease-associated mRNAs will form an important new field of research.

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References
1.
Tano K, Mizuno R, Okada T, Rakwal R, Shibato J, Masuo Y . MALAT-1 enhances cell motility of lung adenocarcinoma cells by influencing the expression of motility-related genes. FEBS Lett. 2010; 584(22):4575-80. DOI: 10.1016/j.febslet.2010.10.008. View

2.
Zhang L, Liu Y, Song F, Zheng H, Hu L, Lu H . Functional SNP in the microRNA-367 binding site in the 3'UTR of the calcium channel ryanodine receptor gene 3 (RYR3) affects breast cancer risk and calcification. Proc Natl Acad Sci U S A. 2011; 108(33):13653-8. PMC: 3158174. DOI: 10.1073/pnas.1103360108. View

3.
Kloc M, Wilk K, Vargas D, Shirato Y, Bilinski S, Etkin L . Potential structural role of non-coding and coding RNAs in the organization of the cytoskeleton at the vegetal cortex of Xenopus oocytes. Development. 2005; 132(15):3445-57. DOI: 10.1242/dev.01919. View

4.
He N, Jahchan N, Hong E, Li Q, Bayfield M, Maraia R . A La-related protein modulates 7SK snRNP integrity to suppress P-TEFb-dependent transcriptional elongation and tumorigenesis. Mol Cell. 2008; 29(5):588-99. PMC: 6239424. DOI: 10.1016/j.molcel.2008.01.003. View

5.
Kindler S, Wang H, Richter D, Tiedge H . RNA transport and local control of translation. Annu Rev Cell Dev Biol. 2005; 21:223-45. PMC: 1850961. DOI: 10.1146/annurev.cellbio.21.122303.120653. View