A Simple, Rapid and Economic Method for Detecting Multidrug-resistant Tuberculosis
Overview
Affiliations
Objective: To evaluate multiplex allele specific polymerase chain reaction as a rapid molecular tool for detecting multidrug-resistant tuberculosis.
Methods: Based on drug susceptibility testing, 103 isolates were multidrug-resistant tuberculosis and 45 isolates were sensitive to isonicotinylhydrazine and rifampin. Primers were designed to target five mutations hotspots that confer resistance to the first-line drugs isoniazid and rifampin, and multiplex allele specific polymerase chain reaction was performed. Whole-genome sequencing confirmed drug resistance mutations identified by multiplex allele specific polymerase chain reaction.
Results: DNA sequencing revealed that 68.9% of multidrug-resistant strains have point mutations at codon 315 of the katG gene, 19.8% within the mabA-inhA promoter, and 98.0% at three hotspots within rpoB. Multiplex allele specific polymerase chain reaction detected each of these five mutations, yielding 82.3% sensitivity and 100% specificity for isoniazid resistance, and 97.9% sensitivity and 100% specificity for rifampin resistance as compared to drug susceptibility testing.
Conclusions: The results show that multiplex allele specific polymerase chain reaction is an inexpensive and practical method for rapid detection of multidrug-resistant tuberculosis in developing countries.
Cafe Oliveira L, Muniz-Sobrinho J, Viana-Magno L, Oliveira Melo S, Macho A, Rios-Santos F Braz J Infect Dis. 2016; 20(2):166-72.
PMID: 26874220 PMC: 9427640. DOI: 10.1016/j.bjid.2015.12.008.
Dantas N, Suffys P, Carvalho W, Magdinier Gomes H, de Almeida I, de Assis L BMC Infect Dis. 2015; 15:306.
PMID: 26231661 PMC: 4521345. DOI: 10.1186/s12879-015-1057-y.