» Articles » PMID: 23974438

Identification of Neoblast- and Regeneration-specific MiRNAs in the Planarian Schmidtea Mediterranea

Overview
Journal RNA
Specialty Molecular Biology
Date 2013 Aug 27
PMID 23974438
Citations 19
Authors
Affiliations
Soon will be listed here.
Abstract

In recent years, the planarian Schmidtea mediterranea has emerged as a tractable model system to study stem cell biology and regeneration. MicroRNAs are small RNA species that control gene expression by modulating translational repression and mRNA stability and have been implicated in the regulation of various cellular processes. Though recent studies have identified several miRNAs in S. mediterranea, their expression in neoblast subpopulations and during regeneration has not been examined. Here, we identify several miRNAs whose expression is enriched in different neoblast subpopulations and in regenerating tissue at different time points in S. mediterranea. Some of these miRNAs were enriched within 3 h post-amputation and may, therefore, play a role in wound healing and/or neoblast migration. Our results also revealed miRNAs, such as sme-miR-2d-3p and the sme-miR-124 family, whose expression is enriched in the cephalic ganglia, are also expressed in the brain primordium during CNS regeneration. These results provide new insight into the potential biological functions of miRNAs in neoblasts and regeneration in planarians.

Citing Articles

Stem cells (neoblasts) and positional information jointly dominate regeneration in planarians.

Chen X Heliyon. 2025; 11(2):e41833.

PMID: 39877626 PMC: 11773080. DOI: 10.1016/j.heliyon.2025.e41833.


Mining of potentially stem cell-related miRNAs in planarians.

Xing N, Gao L, Xie W, Deng H, Yang F, Liu D Mol Biol Rep. 2024; 51(1):1045.

PMID: 39377855 DOI: 10.1007/s11033-024-09977-6.


Purification of Planarian Stem Cells Using a Draq5-Based FACS Approach.

Wang K, Tapper J, Adler C Methods Mol Biol. 2024; 2805:203-212.

PMID: 39008184 DOI: 10.1007/978-1-0716-3854-5_14.


microRNAs: Critical Players during Helminth Infections.

Rojas-Pirela M, Andrade-Alviarez D, Quinones W, Rojas M, Castillo C, Liempi A Microorganisms. 2023; 11(1).

PMID: 36677353 PMC: 9861972. DOI: 10.3390/microorganisms11010061.


An Emerging Frontier in Intercellular Communication: Extracellular Vesicles in Regeneration.

Avalos P, Forsthoefel D Front Cell Dev Biol. 2022; 10:849905.

PMID: 35646926 PMC: 9130466. DOI: 10.3389/fcell.2022.849905.


References
1.
Solana J, Kao D, Mihaylova Y, Jaber-Hijazi F, Malla S, Wilson R . Defining the molecular profile of planarian pluripotent stem cells using a combinatorial RNAseq, RNA interference and irradiation approach. Genome Biol. 2012; 13(3):R19. PMC: 3439970. DOI: 10.1186/gb-2012-13-3-r19. View

2.
Xu J, Wong C . A computational screen for mouse signaling pathways targeted by microRNA clusters. RNA. 2008; 14(7):1276-83. PMC: 2441985. DOI: 10.1261/rna.997708. View

3.
Friedlander M, Mackowiak S, Li N, Chen W, Rajewsky N . miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades. Nucleic Acids Res. 2011; 40(1):37-52. PMC: 3245920. DOI: 10.1093/nar/gkr688. View

4.
Onal P, Grun D, Adamidi C, Rybak A, Solana J, Mastrobuoni G . Gene expression of pluripotency determinants is conserved between mammalian and planarian stem cells. EMBO J. 2012; 31(12):2755-69. PMC: 3380209. DOI: 10.1038/emboj.2012.110. View

5.
Saldanha A . Java Treeview--extensible visualization of microarray data. Bioinformatics. 2004; 20(17):3246-8. DOI: 10.1093/bioinformatics/bth349. View