» Articles » PMID: 23587023

Sequential Oxidations of Thiolates and the Cobalt Metallocenter in a Synthetic Metallopeptide: Implications for the Biosynthesis of Nitrile Hydratase

Overview
Journal Inorg Chem
Specialty Chemistry
Date 2013 Apr 17
PMID 23587023
Citations 4
Authors
Affiliations
Soon will be listed here.
Abstract

Cobalt nitrile hydratases (Co-NHase) contain a catalytic cobalt(III) ion coordinated in an N2S3 first coordination sphere composed of two amidate nitrogens and three cysteine-derived sulfur donors: a thiolate (-SR), a sulfenate (-S(R)O(-)), and a sulfinate (-S(R)O2(-)). The sequence of biosynthetic reactions that leads to the post-translational oxidations of the metal and the sulfur ligands is unknown, but the process is believed to be initiated directly by oxygen. Herein we utilize cobalt bound in an N2S2 first coordination sphere by a seven amino acid peptide known as SODA (ACDLPCG) to model this oxidation process. Upon exposure to oxygen, Co-SODA is oxidized in two steps. In the first fast step (seconds), magnetic susceptibility measurements demonstrated that the metallocenter remains paramagnetic, that is, Co(2+), and sulfur K-edge X-ray absorption spectroscopy (XAS) is used to show that one of the thiolates is oxidized to sulfinate. In a second process on a longer time scale (hours), magnetic susceptibility measurements and Co K-edge XAS show that the metal is oxidized to Co(3+). Unlike other model complexes, additional slow oxidation of the second thiolate in Co-SODA is not observed, and a catalytically active complex is never formed. The likely reason is the absence of the axial thiolate ligand. In essence, the reactivity of Co-SODA can be described as between previously described models which either quickly convert to final product or are stable in air, and it offers a first glimpse into a possible oxidation pathway for nitrile hydratase biosynthesis.

Citing Articles

pH Dependent Reversible Formation of a Binuclear Ni Metal-Center Within a Peptide Scaffold.

Keegan B, Ocampo D, Shearer J Inorganics (Basel). 2023; 7(7).

PMID: 38046130 PMC: 10691859. DOI: 10.3390/inorganics7070090.


COG0523 proteins: a functionally diverse family of transition metal-regulated G3E P-loop GTP hydrolases from bacteria to man.

Edmonds K, Jordan M, Giedroc D Metallomics. 2021; 13(8).

PMID: 34302342 PMC: 8360895. DOI: 10.1093/mtomcs/mfab046.


Synthesis and reactivity of a mononuclear non-haem cobalt(IV)-oxo complex.

Wang B, Lee Y, Tcho W, Tussupbayev S, Kim S, Kim Y Nat Commun. 2017; 8:14839.

PMID: 28337985 PMC: 5376677. DOI: 10.1038/ncomms14839.


Construction of a subunit-fusion nitrile hydratase and discovery of an innovative metal ion transfer pattern.

Xia Y, Cui W, Liu Z, Zhou L, Cui Y, Kobayashi M Sci Rep. 2016; 6:19183.

PMID: 26755342 PMC: 4709657. DOI: 10.1038/srep19183.

References
1.
Ellman G . A colorimetric method for determining low concentrations of mercaptans. Arch Biochem Biophys. 1958; 74(2):443-50. DOI: 10.1016/0003-9861(58)90014-6. View

2.
Dickinson B, Chang C . Chemistry and biology of reactive oxygen species in signaling or stress responses. Nat Chem Biol. 2011; 7(8):504-11. PMC: 3390228. DOI: 10.1038/nchembio.607. View

3.
Simmons C, Lundeen M, Seff K . Crystal and molecular structure of (2,9-dimethyl-1,10-phenanthroline)(glycylglycinato)copper(II) pentahydrate. Inorg Chem. 2009; 17(6):1429-35. DOI: 10.1021/ic50184a007. View

4.
Rizzi A, Brondino C, Calvo R, Baggio R, Garland M, Rapp R . Structure and magnetic properties of layered high-spin Co(II)(l-threonine)2(H2O)2. Inorg Chem. 2003; 42(14):4409-16. DOI: 10.1021/ic026111b. View

5.
CONDRATE R, Nakamoto K . INFRARED SPECTRA AND NORMAL COORDINATE ANALYSIS OF METAL GLYCINO COMPLEXES. J Chem Phys. 1965; 42:2590-8. DOI: 10.1063/1.1696337. View