» Articles » PMID: 23364209

The General Population Cohort in Rural South-western Uganda: a Platform for Communicable and Non-communicable Disease Studies

Abstract

The General Population Cohort (GPC) was set up in 1989 to examine trends in HIV prevalence and incidence, and their determinants in rural south-western Uganda. Recently, the research questions have included the epidemiology and genetics of communicable and non-communicable diseases (NCDs) to address the limited data on the burden and risk factors for NCDs in sub-Saharan Africa. The cohort comprises all residents (52% aged ≥13years, men and women in equal proportions) within one-half of a rural sub-county, residing in scattered houses, and largely farmers of three major ethnic groups. Data collected through annual surveys include; mapping for spatial analysis and participant location; census for individual socio-demographic and household socioeconomic status assessment; and a medical survey for health, lifestyle and biophysical and blood measurements to ascertain disease outcomes and risk factors for selected participants. This cohort offers a rich platform to investigate the interplay between communicable diseases and NCDs. There is robust infrastructure for data management, sample processing and storage, and diverse expertise in epidemiology, social and basic sciences. For any data access enquiries you may contact the director, MRC/UVRI, Uganda Research Unit on AIDS by email to mrc@mrcuganda.org or the corresponding author.

Citing Articles

Whole genome sequencing of hepatitis B virus using tiled amplicon (HEPTILE) and probe based enrichment on Illumina and Nanopore platforms.

Lumley S, Kent C, Jennings D, Chai H, Airey G, Waddilove E Sci Rep. 2025; 15(1):5795.

PMID: 39962085 PMC: 11832747. DOI: 10.1038/s41598-025-87721-1.


Leaving no one behind: Disability and HIV prevention, knowledge among adults in a population cohort in Uganda.

Mugisha J, Makanga R, Kimono B, Kasamba I Afr J Disabil. 2025; 13():1497.

PMID: 39822744 PMC: 11736553. DOI: 10.4102/ajod.v13i0.1497.


Use of mobile phones to collect data on COVID-19: phone access and participation rates, in Rakai, Uganda.

Ssekubugu R, Ndyanabo A, Makumbi F, Ekstrom A, Beres L, Kigozi G Glob Health Action. 2024; 17(1):2419160.

PMID: 39529556 PMC: 11559023. DOI: 10.1080/16549716.2024.2419160.


Infant feeding and treatment practices could lead to enhanced transmission of Kaposi's sarcoma-associated herpesvirus (KSHV) and other orally shed infections via saliva, in rural south-western Uganda.

Bukenya D, Marshall V, Nabaggala G, Miley W, Mirembe M, Whitby D Glob Public Health. 2024; 19(1):2418594.

PMID: 39467162 PMC: 11771154. DOI: 10.1080/17441692.2024.2418594.


Prevalence, aetiology, and service mapping of dementia in rural Uganda. .

Prynn J, Alinaitwe R, Kimono B, Peto T, Ashton N, Steves C Wellcome Open Res. 2024; 9():544.

PMID: 39429626 PMC: 11490832. DOI: 10.12688/wellcomeopenres.22944.1.


References
1.
Mbulaiteye S, Reeves B, Karabalinde A, Ruberantwari A, Mulwanyi F, Whitworth J . Evaluation of E-optotypes as a screening test and the prevalence and causes of visual loss in a rural population in SW Uganda. Ophthalmic Epidemiol. 2002; 9(4):251-62. DOI: 10.1076/opep.9.4.251.1509. View

2.
Brown T, Cole S, Li X, Kingsley L, Palella F, Riddler S . Antiretroviral therapy and the prevalence and incidence of diabetes mellitus in the multicenter AIDS cohort study. Arch Intern Med. 2005; 165(10):1179-84. DOI: 10.1001/archinte.165.10.1179. View

3.
Hill A . Aspects of genetic susceptibility to human infectious diseases. Annu Rev Genet. 2006; 40:469-86. DOI: 10.1146/annurev.genet.40.110405.090546. View

4.
Maher D, Sekajugo J . Research on health transition in Africa: time for action. Health Res Policy Syst. 2011; 9:5. PMC: 3038153. DOI: 10.1186/1478-4505-9-5. View

5.
Mbulaiteye S, Mahe C, Whitworth J, Ruberantwari A, Nakiyingi J, Ojwiya A . Declining HIV-1 incidence and associated prevalence over 10 years in a rural population in south-west Uganda: a cohort study. Lancet. 2002; 360(9326):41-6. DOI: 10.1016/s0140-6736(02)09331-5. View