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Saponin Promotes Rapid Identification and Antimicrobial Susceptibility Profiling of Gram-positive and Gram-negative Bacteria in Blood Cultures with the Vitek 2 System

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Publisher Springer
Date 2012 Nov 2
PMID 23114724
Citations 10
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Abstract

The rapid identification and antimicrobial susceptibility testing (AST) of bacteria in clinical blood cultures is crucial to optimise antimicrobial therapy. A previous study involving small sample numbers revealed that the addition of saponin to blood cultures, further referred to as the new method, shortened considerably the turn-around time for the identification and AST of Gram-positive cocci as compared to the current method involving an overnight subculture. Here, we extend previous results and compare the identification and AST of blood cultures containing Gram-negative bacilli by the new and current methods. The identification and AST of 121 Gram-positive and 109 Gram-negative bacteria in clinical monomicrobial blood cultures by the new and current methods and, in the case of Gram-negative bacilli, by direct (no additions) inoculation into an automated system (rapid method) was assessed using the Vitek 2 system. Discrepancies between the results obtained with the different methods were solved by manual methods. The new method correctly identified 88 % of Gram-positive and 98 % of Gram-negative bacteria, and the rapid method correctly identified 94 % of Gram-negative bacteria. The AST for all antimicrobials by the new method were concordant with the current method for 55 % and correct for an additional 9 % of Gram-positive bacteria, and concordant with the current method for 62 % and correct for an additional 21 % of Gram-negative bacilli. The AST by the rapid method was concordant with the current method for 62 % and correct for an additional 12 % of Gram-negative bacilli. Together, saponin-treated monomicrobial blood cultures allow rapid and reliable identification and AST of Gram-positive and Gram-negative bacteria.

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References
1.
Lupetti A, Barnini S, Castagna B, Nibbering P, Campa M . Rapid identification and antimicrobial susceptibility testing of Gram-positive cocci in blood cultures by direct inoculation into the BD Phoenix system. Clin Microbiol Infect. 2009; 16(7):986-91. DOI: 10.1111/j.1469-0691.2009.03006.x. View

2.
Fontanals D, Salceda F, Hernandez J, Sanfeliu I, Torra M . Evaluation of wider system for direct identification and antimicrobial susceptibility testing of gram-negative bacilli from positive blood culture bottles. Eur J Clin Microbiol Infect Dis. 2002; 21(9):693-5. DOI: 10.1007/s10096-002-0791-4. View

3.
Peters R, de Boer R, Schuurman T, Gierveld S, Kooistra-Smid M, van Agtmael M . Streptococcus pneumoniae DNA load in blood as a marker of infection in patients with community-acquired pneumonia. J Clin Microbiol. 2009; 47(10):3308-12. PMC: 2756912. DOI: 10.1128/JCM.01071-09. View

4.
Doern G, Vautour R, Gaudet M, Levy B . Clinical impact of rapid in vitro susceptibility testing and bacterial identification. J Clin Microbiol. 1994; 32(7):1757-62. PMC: 263786. DOI: 10.1128/jcm.32.7.1757-1762.1994. View

5.
Sparbier K, Schubert S, Weller U, Boogen C, Kostrzewa M . Matrix-assisted laser desorption ionization-time of flight mass spectrometry-based functional assay for rapid detection of resistance against β-lactam antibiotics. J Clin Microbiol. 2011; 50(3):927-37. PMC: 3295133. DOI: 10.1128/JCM.05737-11. View