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Cloud Computing for Comparative Genomics with Windows Azure Platform

Overview
Publisher Sage Publications
Specialty Biology
Date 2012 Oct 4
PMID 23032609
Citations 3
Authors
Affiliations
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Abstract

Cloud computing services have emerged as a cost-effective alternative for cluster systems as the number of genomes and required computation power to analyze them increased in recent years. Here we introduce the Microsoft Azure platform with detailed execution steps and a cost comparison with Amazon Web Services.

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References
1.
DeLuca T, Cui J, Jung J, St Gabriel K, Wall D . Roundup 2.0: enabling comparative genomics for over 1800 genomes. Bioinformatics. 2012; 28(5):715-6. PMC: 3289913. DOI: 10.1093/bioinformatics/bts006. View

2.
Wall D, Kudtarkar P, Fusaro V, Pivovarov R, Patil P, Tonellato P . Cloud computing for comparative genomics. BMC Bioinformatics. 2010; 11:259. PMC: 3098063. DOI: 10.1186/1471-2105-11-259. View

3.
. Reorganizing the protein space at the Universal Protein Resource (UniProt). Nucleic Acids Res. 2011; 40(Database issue):D71-5. PMC: 3245120. DOI: 10.1093/nar/gkr981. View

4.
Kudtarkar P, DeLuca T, Fusaro V, Tonellato P, Wall D . Cost-effective cloud computing: a case study using the comparative genomics tool, roundup. Evol Bioinform Online. 2011; 6:197-203. PMC: 3023304. DOI: 10.4137/EBO.S6259. View

5.
FITCH W . Distinguishing homologous from analogous proteins. Syst Zool. 1970; 19(2):99-113. View