» Articles » PMID: 23018778

Ribonuclease P-mediated Inhibition of Human Cytomegalovirus Gene Expression and Replication Induced by Engineered External Guide Sequences

Overview
Journal RNA Biol
Specialty Molecular Biology
Date 2012 Sep 29
PMID 23018778
Citations 8
Authors
Affiliations
Soon will be listed here.
Abstract

External guide sequences (EGSs) are RNA molecules that can bind to a target mRNA and direct ribonuclease P (RNase P), a tRNA processing enzyme, for specific cleavage of the target mRNA. Using an in vitro selection procedure, we have previously generated EGS variants that efficiently direct human RNase P to cleave a target mRNA in vitro. In this study, we constructed EGSs from a variant to target the overlapping region of the mRNAs coding for human cytomegalovirus (HCMV) capsid scaffolding protein (CSP) and assemblin, which are essential for viral capsid formation. The EGS variant was about 40-fold more active in directing human RNase P to cleave the mRNA in vitro than the EGS derived from a natural tRNA. Moreover, a reduction of about 98% and 75% in CSP/assemblin gene expression and a reduction of 7000- and 250-fold in viral growth were observed in HCMV-infected cells that expressed the variant and the tRNA-derived EGS, respectively. Our study shows that the EGS variant is more effective in blocking HCMV gene expression and growth than the tRNA-derived EGS. Moreover, these results demonstrate the utility of highly active EGS RNA variants in gene targeting applications including anti-HCMV therapy.

Citing Articles

Mapping of RNase P Ribozyme Regions in Proximity with a Human RNase P Subunit Protein Using Fe(II)-EDTA Cleavage and Nuclease Footprint Analyses.

Trang P, Smith A, Liu F Methods Mol Biol. 2023; 2666:55-67.

PMID: 37166656 DOI: 10.1007/978-1-0716-3191-1_4.


Inhibition of human cytomegalovirus major capsid protein expression and replication by ribonuclease P-associated external guide sequences.

Deng Q, Liu Y, Li X, Yan B, Sun X, Tang W RNA. 2019; 25(5):645-655.

PMID: 30803999 PMC: 6467005. DOI: 10.1261/rna.069682.118.


Engineered RNase P Ribozymes Effectively Inhibit the Infection of Murine Cytomegalovirus in Animals.

Li W, Liu Y, Wang Y, Li R, Trang P, Tang W Theranostics. 2018; 8(20):5634-5644.

PMID: 30555569 PMC: 6276291. DOI: 10.7150/thno.27776.


Viral tRNA Mimicry from a Biocommunicative Perspective.

Ariza-Mateos A, Gomez J Front Microbiol. 2017; 8:2395.

PMID: 29259593 PMC: 5723415. DOI: 10.3389/fmicb.2017.02395.


RNase P-Mediated Sequence-Specific Cleavage of RNA by Engineered External Guide Sequences.

Derksen M, Mertens V, Pruijn G Biomolecules. 2015; 5(4):3029-50.

PMID: 26569326 PMC: 4693268. DOI: 10.3390/biom5043029.


References
1.
Trang P, Lee M, Nepomuceno E, Kim J, Zhu H, Liu F . Effective inhibition of human cytomegalovirus gene expression and replication by a ribozyme derived from the catalytic RNA subunit of RNase P from Escherichia coli. Proc Natl Acad Sci U S A. 2000; 97(11):5812-7. PMC: 18516. DOI: 10.1073/pnas.100101797. View

2.
Szostak J . In vitro genetics. Trends Biochem Sci. 1992; 17(3):89-93. DOI: 10.1016/0968-0004(92)90242-2. View

3.
Dunn W, Chou C, Li H, Hai R, Patterson D, Stolc V . Functional profiling of a human cytomegalovirus genome. Proc Natl Acad Sci U S A. 2003; 100(24):14223-8. PMC: 283573. DOI: 10.1073/pnas.2334032100. View

4.
Forster A, Altman S . External guide sequences for an RNA enzyme. Science. 1990; 249(4970):783-6. DOI: 10.1126/science.1697102. View

5.
Juhling F, Morl M, Hartmann R, Sprinzl M, Stadler P, Putz J . tRNAdb 2009: compilation of tRNA sequences and tRNA genes. Nucleic Acids Res. 2008; 37(Database issue):D159-62. PMC: 2686557. DOI: 10.1093/nar/gkn772. View