Engineering Plant Metabolism into Microbes: from Systems Biology to Synthetic Biology
Overview
Authors
Affiliations
Plant metabolism represents an enormous repository of compounds that are of pharmaceutical and biotechnological importance. Engineering plant metabolism into microbes will provide sustainable solutions to produce pharmaceutical and fuel molecules that could one day replace substantial portions of the current fossil-fuel based economy. Metabolic engineering entails targeted manipulation of biosynthetic pathways to maximize yields of desired products. Recent advances in Systems Biology and the emergence of Synthetic Biology have accelerated our ability to design, construct and optimize cell factories for metabolic engineering applications. Progress in predicting and modeling genome-scale metabolic networks, versatile gene assembly platforms and delicate synthetic pathway optimization strategies has provided us exciting opportunities to exploit the full potential of cell metabolism. In this review, we will discuss how systems and synthetic biology tools can be integrated to create tailor-made cell factories for efficient production of natural products and fuel molecules in microorganisms.
Bioengineered production of glycosaminoglycans and their analogues.
Jin W, Zhang F, Linhardt R Syst Microbiol Biomanuf. 2024; 1(2):123-130.
PMID: 38524245 PMC: 10960223. DOI: 10.1007/s43393-020-00011-x.
Modular co-culture engineering of Yarrowia lipolytica for amorphadiene biosynthesis.
Marsafari M, Azi F, Dou S, Xu P Microb Cell Fact. 2022; 21(1):279.
PMID: 36587216 PMC: 9805133. DOI: 10.1186/s12934-022-02010-0.
From genetics to biotechnology: Synthetic biology as a flexible course-embedded research experience.
Johnson K, Sabel J, Cole J, Pruett C, Plymale R, Reyna N Biochem Mol Biol Educ. 2022; 50(6):580-591.
PMID: 36053869 PMC: 9826443. DOI: 10.1002/bmb.21662.
Compartmentalization and transporter engineering strategies for terpenoid synthesis.
Jin K, Xia H, Liu Y, Li J, Du G, Lv X Microb Cell Fact. 2022; 21(1):92.
PMID: 35599322 PMC: 9125818. DOI: 10.1186/s12934-022-01819-z.
A Golden-Gate Based Cloning Toolkit to Build Violacein Pathway Libraries in .
Tong Y, Zhou J, Zhang L, Xu P ACS Synth Biol. 2021; 10(1):115-124.
PMID: 33399465 PMC: 7812646. DOI: 10.1021/acssynbio.0c00469.