Validation for Clinical Use of a Novel HIV-2 Plasma RNA Viral Load Assay Using the Abbott M2000 Platform
Overview
Authors
Affiliations
Background: Optimal care of persons infected with human immunodeficiency virus type 2 (HIV-2) requires an accurate assessment of HIV-2 plasma viral load (VL), but no clinically approved quantitative HIV-2 RNA VL assay exists.
Objectives: To validate a novel quantitative HIV-2 RNA assay for clinical and research use.
Study Design: The Abbott m2000sp/rt platform was adapted for quantification of HIV-2 RNA in plasma. Amplification targeted a region of the long terminal repeat conserved in Group A and B HIV-2. Electron microscopy-counted-HIV-2 standards, the WHO/NIBSC HIV-2 International Standard and clinical specimens (N=162) were used to determine the precision, sensitivity, specificity, linear range, accuracy, and clinical performance of the assay.
Results: The quantitative linear range of the HIV-2 RNA assay was 10-1,000,000 copies/mL (R(2)>0.99), with a limit of detection of 8 copies/mL (95% CI, 5-18 copies/mL). The assay did not cross-react with HIV-1, and quantification of HIV-2 RNA was not affected by the presence of >5 log(10)HIV-1 RNA copies/mL. The total standard deviation (SD) and intra- and inter-run SD were 0.095, 0.093 and 0.162, respectively, at nominal inputs of 3.7, 1.7 and 1.0 log(10)HIV-2 RNA copies/mL. The HIV-2 WHO/NIBSC International Standard (1000 IU) was shown to contain 152 RNA copies/mL (95% CI 141-163). Overall, HIV-2 RNA was quantified at ≥10 copies/mL from 86 (53%) clinical specimens (median, 2.24 log(10) copies/mL; range 10-16,870), and nine specimens (6%) had HIV-2 RNA detected at <10 copies/mL.
Conclusions: We developed and validated a highly sensitive HIV-2 VL assay that is suitable for clinical and research use.
Novel assays to investigate the mechanisms of latent infection with HIV-2.
Lu M, Telwatte S, Kumar N, Ferreira F, Martin H, Kadiyala G PLoS One. 2022; 17(4):e0267402.
PMID: 35476802 PMC: 9045618. DOI: 10.1371/journal.pone.0267402.
Raugi D, Diallo K, Diallo M, Faye D, Cisse O, Smith R Trials. 2021; 22(1):931.
PMID: 34922614 PMC: 8683814. DOI: 10.1186/s13063-021-05902-5.
Duncan D, Duncan J, Kramer B, Nilsson A, Haile B, Butcher A J Clin Microbiol. 2021; 59(7):e0303020.
PMID: 33853869 PMC: 8218759. DOI: 10.1128/JCM.03030-20.
Raugi D, Ba S, Cisse O, Diallo K, Tamba I, Ndour C Clin Infect Dis. 2021; 72(3):369-378.
PMID: 33527119 PMC: 7850514. DOI: 10.1093/cid/ciaa277.
HIV-2 Drug Resistance Genotyping from Dried Blood Spots.
Raugi D, Nixon R, Leong S, Faye K, Diatta J, Sall F J Clin Microbiol. 2020; 59(1).
PMID: 33055182 PMC: 7771475. DOI: 10.1128/JCM.02303-20.