» Articles » PMID: 22749909

Concerted Action of the PHD, Chromo and Motor Domains Regulates the Human Chromatin Remodelling ATPase CHD4

Overview
Journal FEBS Lett
Specialty Biochemistry
Date 2012 Jul 4
PMID 22749909
Citations 26
Authors
Affiliations
Soon will be listed here.
Abstract

CHD4, the core subunit of the Nucleosome Remodelling and Deacetylase (NuRD) complex, is a chromatin remodelling ATPase that, in addition to a helicase domain, harbors tandem plant homeo finger and chromo domains. By using a panel of domain constructs we dissect their roles and demonstrate that DNA binding, histone binding and ATPase activities are allosterically regulated. Molecular shape reconstruction from small-angle X-ray scattering reveals extensive domain-domain interactions, which provide a structural explanation for the regulation of CHD4 activities by intramolecular domain communication. Our results demonstrate functional interdependency between domains within a chromatin remodeller.

Citing Articles

Chromatin remodeling protein CHD4 regulates axon guidance of spiral ganglion neurons in developing cochlea.

Kim J, Martinez E, Qiu J, Zhouli Ni J, Kwan K bioRxiv. 2024; .

PMID: 38352369 PMC: 10862897. DOI: 10.1101/2024.01.31.578202.


Generation of a Well-Characterized Homozygous Chromodomain-Helicase-DNA-Binding Protein 4 Mutant hESC Line Using CRISPR/eCas9 (ULIEGEe001-A-1).

Chohra I, Giri S, Malgrange B Int J Mol Sci. 2023; 24(13).

PMID: 37445725 PMC: 10342000. DOI: 10.3390/ijms241310543.


Chromodomain helicase DNA binding protein 4 in cell fate decisions.

Laureano A, Kim J, Martinez E, Kwan K Hear Res. 2023; 436:108813.

PMID: 37329862 PMC: 10463912. DOI: 10.1016/j.heares.2023.108813.


Gene Ensures Germline Stem Cell Differentiation by Promoting the Transcription of .

Szarka-Kovacs A, Takacs Z, Bence M, Erdelyi M, Jankovics F Cells. 2022; 11(13).

PMID: 35805140 PMC: 9265997. DOI: 10.3390/cells11132056.


KSHV episome tethering sites on host chromosomes and regulation of latency-lytic switch by CHD4.

Kumar A, Lyu Y, Yanagihashi Y, Chantarasrivong C, Majerciak V, Salemi M Cell Rep. 2022; 39(6):110788.

PMID: 35545047 PMC: 9153692. DOI: 10.1016/j.celrep.2022.110788.


References
1.
Eisen J, Sweder K, HANAWALT P . Evolution of the SNF2 family of proteins: subfamilies with distinct sequences and functions. Nucleic Acids Res. 1995; 23(14):2715-23. PMC: 307096. DOI: 10.1093/nar/23.14.2715. View

2.
Gao H, Lukin K, Ramirez J, Fields S, Lopez D, Hagman J . Opposing effects of SWI/SNF and Mi-2/NuRD chromatin remodeling complexes on epigenetic reprogramming by EBF and Pax5. Proc Natl Acad Sci U S A. 2009; 106(27):11258-63. PMC: 2708696. DOI: 10.1073/pnas.0809485106. View

3.
Lisal J, Kainov D, Bamford D, Thomas Jr G, Tuma R . Enzymatic mechanism of RNA translocation in double-stranded RNA bacteriophages. J Biol Chem. 2003; 279(2):1343-50. DOI: 10.1074/jbc.M309587200. View

4.
Nishioka K, Chuikov S, Sarma K, Erdjument-Bromage H, Allis C, Tempst P . Set9, a novel histone H3 methyltransferase that facilitates transcription by precluding histone tail modifications required for heterochromatin formation. Genes Dev. 2002; 16(4):479-89. PMC: 155346. DOI: 10.1101/gad.967202. View

5.
Akhtar A, Zink D, Becker P . Chromodomains are protein-RNA interaction modules. Nature. 2000; 407(6802):405-9. DOI: 10.1038/35030169. View