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Genome Sequence of Strain HIMB624, a Cultured Representative from the OM43 Clade of Marine Betaproteobacteria

Overview
Publisher Biomed Central
Specialty Genetics
Date 2012 Jun 8
PMID 22675594
Citations 20
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References
1.
Ludwig W, Strunk O, Westram R, Richter L, Meier H, Yadhukumar . ARB: a software environment for sequence data. Nucleic Acids Res. 2004; 32(4):1363-71. PMC: 390282. DOI: 10.1093/nar/gkh293. View

2.
Pruesse E, Quast C, Knittel K, Fuchs B, Ludwig W, Peplies J . SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res. 2007; 35(21):7188-96. PMC: 2175337. DOI: 10.1093/nar/gkm864. View

3.
Field D, Garrity G, Gray T, Morrison N, Selengut J, Sterk P . The minimum information about a genome sequence (MIGS) specification. Nat Biotechnol. 2008; 26(5):541-7. PMC: 2409278. DOI: 10.1038/nbt1360. View

4.
Aziz R, Bartels D, Best A, DeJongh M, Disz T, Edwards R . The RAST Server: rapid annotations using subsystems technology. BMC Genomics. 2008; 9:75. PMC: 2265698. DOI: 10.1186/1471-2164-9-75. View

5.
RAPPE , Vergin , Giovannoni . Phylogenetic comparisons of a coastal bacterioplankton community with its counterparts in open ocean and freshwater systems. FEMS Microbiol Ecol. 2000; 33(3):219-232. DOI: 10.1111/j.1574-6941.2000.tb00744.x. View