Electing a Candidate: a Speculative History of the Bacterial Phylum OP10
Overview
Microbiology
Affiliations
In 1998, a cultivation-independent survey of the microbial community in Obsidian Pool, Yellowstone National Park, detected 12 new phyla within the Domain Bacteria. These were dubbed 'candidate divisions' OP1 to OP12. Since that time the OP10 candidate division has been commonly detected in various environments, usually as part of the rare biosphere, but occasionally as a predominant community component. Based on 16S rRNA gene phylogeny, OP10 comprises at least 12 class-level subdivisions. However, despite this broad ecological and evolutionary diversity, all OP10 bacteria have eluded cultivation until recently. In 2011, two reference species of OP10 were taxonomically validated, removing the phylum from its 'candidate' status. Construction of a highly resolved phylogeny based on 29 universally conserved genes verifies its standing as a unique bacterial phylum. In the following paper we summarize what is known and what is suspected about the newest described bacterial phylum, the Armatimonadetes.
Nene M, Kunene N, Pierneef R, Hadebe K Front Microbiol. 2025; 15:1487595.
PMID: 39968048 PMC: 11832711. DOI: 10.3389/fmicb.2024.1487595.
Hot in Cold: Microbial Life in the Hottest Springs in Permafrost.
Kochetkova T, Toshchakov S, Zayulina K, Elcheninov A, Zavarzina D, Lavrushin V Microorganisms. 2020; 8(9).
PMID: 32867302 PMC: 7565842. DOI: 10.3390/microorganisms8091308.
Air-side ammonia stripping coupled to anaerobic digestion indirectly impacts anaerobic microbiome.
Fernandez-Gonzalez N, Pedizzi C, Lema J, Carballa M Microb Biotechnol. 2019; 12(6):1403-1416.
PMID: 31532080 PMC: 6801131. DOI: 10.1111/1751-7915.13482.
Ward L, Idei A, Nakagawa M, Ueno Y, W Fischer W, McGlynn S Microbes Environ. 2019; 34(3):278-292.
PMID: 31413226 PMC: 6759342. DOI: 10.1264/jsme2.ME19017.
Draft Genome Sequences of Two Uncultured Associated with a sp. () Isolate.
Woodhouse J, Makower A, Grossart H, Dittmann E Genome Announc. 2017; 5(40).
PMID: 28982984 PMC: 5629041. DOI: 10.1128/genomeA.00717-17.