Design and Synthesis of Novel DFG-out RAF/vascular Endothelial Growth Factor Receptor 2 (VEGFR2) Inhibitors. 1. Exploration of [5,6]-fused Bicyclic Scaffolds
Overview
Authors
Affiliations
To develop RAF/VEGFR2 inhibitors that bind to the inactive DFG-out conformation, we conducted structure-based drug design using the X-ray cocrystal structures of BRAF, starting from an imidazo[1,2-b]pyridazine derivative. We designed various [5,6]-fused bicyclic scaffolds (ring A, 1-6) possessing an anilide group that forms two hydrogen bond interactions with Cys532. Stabilizing the planarity of this anilide and the nitrogen atom on the six-membered ring of the scaffold was critical for enhancing BRAF inhibition. The selected [1,3]thiazolo[5,4-b]pyridine derivative 6d showed potent inhibitory activity in both BRAF and VEGFR2. Solid dispersion formulation of 6d (6d-SD) maximized its oral absorption in rats and showed significant suppression of ERK1/2 phosphorylation in an A375 melanoma xenograft model in rats by single administration. Tumor regression (T/C = -7.0%) in twice-daily repetitive studies at a dose of 50 mg/kg in rats confirmed that 6d is a promising RAF/VEGFR2 inhibitor showing potent anticancer activity.
Mohamed A, Abou-Ghadir O, Mostafa Y, Almarhoon Z, Brase S, Youssif B RSC Adv. 2024; 14(52):38403-38415.
PMID: 39640522 PMC: 11618052. DOI: 10.1039/d4ra06694d.
Mohamed A, Abou-Ghadir O, Mostafa Y, Dahlous K, Brase S, Youssif B Front Chem. 2024; 12:1447618.
PMID: 39281035 PMC: 11393688. DOI: 10.3389/fchem.2024.1447618.
Variations of VEGFR2 Chemical Space: Stimulator and Inhibitory Peptides.
Lungu C, Mangalagiu I, Gurau G, Mehedinti M Int J Mol Sci. 2024; 25(14).
PMID: 39063029 PMC: 11276785. DOI: 10.3390/ijms25147787.
Fouad M, Osman A, Abdelhamid N, Rashad M, Nabawy A, El Kerdawy A BMC Chem. 2024; 18(1):29.
PMID: 38347617 PMC: 10863211. DOI: 10.1186/s13065-024-01130-5.
Al-Wahaibi L, El-Sheref E, Hammouda M, Youssif B Pharmaceuticals (Basel). 2023; 16(3).
PMID: 36986566 PMC: 10056593. DOI: 10.3390/ph16030467.