Sun C, Zhao F
Front Neurosci. 2024; 18:1465642.
PMID: 39498391
PMC: 11532082.
DOI: 10.3389/fnins.2024.1465642.
Zhang L, Huang L, Yuan Z, Hang Y, Zeng Y, Li K
Nat Methods. 2024; 21(10):1936-1946.
PMID: 39232199
PMC: 11468770.
DOI: 10.1038/s41592-024-02401-8.
Abdellah M, Foni A, Cantero J, Roman Guerrero N, Boci E, Fleury A
Brief Bioinform. 2024; 25(5).
PMID: 39129363
PMC: 11317524.
DOI: 10.1093/bib/bbae393.
Tecuatl C, Ljungquist B, Ascoli G
FASEB Bioadv. 2024; 6(7):207-221.
PMID: 38974113
PMC: 11226999.
DOI: 10.1096/fba.2024-00048.
Leite J, Nhoatto F, Jacob Jr A, Santana R, Lobato F
Neuroinformatics. 2024; 22(3):353-377.
PMID: 38922389
DOI: 10.1007/s12021-024-09674-6.
From pixels to connections: exploring in vitro neuron reconstruction software for network graph generation.
Hoffmann C, Cho E, Zalesky A, Di Biase M
Commun Biol. 2024; 7(1):571.
PMID: 38750282
PMC: 11096190.
DOI: 10.1038/s42003-024-06264-9.
Complete Neuron Reconstruction Based on Branch Confidence.
Zeng Y, Wang Y
Brain Sci. 2024; 14(4).
PMID: 38672045
PMC: 11047972.
DOI: 10.3390/brainsci14040396.
Online conversion of reconstructed neural morphologies into standardized SWC format.
Mehta K, Ljungquist B, Ogden J, Nanda S, Ascoli R, Ng L
Nat Commun. 2023; 14(1):7429.
PMID: 37973857
PMC: 10654402.
DOI: 10.1038/s41467-023-42931-x.
CellRemorph: A Toolkit for Transforming, Selecting, and Slicing 3D Cell Structures on the Road to Morphologically Detailed Astrocyte Simulations.
Keto L, Manninen T
Neuroinformatics. 2023; 21(3):483-500.
PMID: 37133688
PMC: 10406679.
DOI: 10.1007/s12021-023-09627-5.
Effects of perinatal exposure to bisphenol A or S in EAE model of multiple sclerosis.
Bonaldo B, Casile A, Montarolo F, Bettarelli M, Napoli F, Gotti S
Cell Tissue Res. 2023; 392(2):467-480.
PMID: 36750500
PMC: 10172280.
DOI: 10.1007/s00441-023-03746-w.
Whole-mouse clearing and imaging at the cellular level with vDISCO.
Cai R, Kolabas Z, Pan C, Mai H, Zhao S, Kaltenecker D
Nat Protoc. 2023; 18(4):1197-1242.
PMID: 36697871
DOI: 10.1038/s41596-022-00788-2.
Tracing weak neuron fibers.
Liu Y, Zhong Y, Zhao X, Liu L, Ding L, Peng H
Bioinformatics. 2022; 39(1).
PMID: 36571479
PMC: 9848051.
DOI: 10.1093/bioinformatics/btac816.
Robust quasi-uniform surface meshing of neuronal morphology using line skeleton-based progressive convolution approximation.
Zhu X, Liu X, Liu S, Shen Y, You L, Wang Y
Front Neuroinform. 2022; 16:953930.
PMID: 36387589
PMC: 9648403.
DOI: 10.3389/fninf.2022.953930.
Efficient Simulation of 3D Reaction-Diffusion in Models of Neurons and Networks.
McDougal R, Conte C, Eggleston L, Newton A, Galijasevic H
Front Neuroinform. 2022; 16:847108.
PMID: 35655652
PMC: 9152282.
DOI: 10.3389/fninf.2022.847108.
Smart imaging to empower brain-wide neuroscience at single-cell levels.
Guo S, Xue J, Liu J, Ye X, Guo Y, Liu D
Brain Inform. 2022; 9(1):10.
PMID: 35543774
PMC: 9095808.
DOI: 10.1186/s40708-022-00158-4.
The mosaic of AII amacrine cell bodies in rat retina is indistinguishable from a random distribution.
Liu J, Peter D, Faldalen Guttormsen M, Hossain M, Gerking Y, Veruki M
Vis Neurosci. 2022; 39:E004.
PMID: 35534787
PMC: 9107964.
DOI: 10.1017/S0952523822000025.
A Comprehensive, FAIR File Format for Neuroanatomical Structure Modeling.
Sullivan A, Tappan S, Angstman P, Rodriguez A, Thomas G, Hoppes D
Neuroinformatics. 2021; 20(1):221-240.
PMID: 34601704
PMC: 8975944.
DOI: 10.1007/s12021-021-09530-x.
NeuroConstruct: 3D Reconstruction and Visualization of Neurites in Optical Microscopy Brain Images.
Ghahremani P, Boorboor S, Mirhosseini P, Gudisagar C, Ananth M, Talmage D
IEEE Trans Vis Comput Graph. 2021; 28(12):4951-4965.
PMID: 34478372
PMC: 11423259.
DOI: 10.1109/TVCG.2021.3109460.
Effects of ovariectomy on inputs from the medial preoptic area to the ventromedial nucleus of the hypothalamus of young adult rats.
Da Silva Pereira L, Gobbo D, Ferreira J, Horta-Junior J, Sa S, Bittencourt J
J Anat. 2020; 238(2):467-479.
PMID: 32914872
PMC: 7812137.
DOI: 10.1111/joa.13304.
The natverse, a versatile toolbox for combining and analysing neuroanatomical data.
Bates A, Manton J, Jagannathan S, Costa M, Schlegel P, Rohlfing T
Elife. 2020; 9.
PMID: 32286229
PMC: 7242028.
DOI: 10.7554/eLife.53350.