» Articles » PMID: 22140558

Interkingdom Gene Transfer of a Hybrid NPS/PKS from Bacteria to Filamentous Ascomycota

Overview
Journal PLoS One
Date 2011 Dec 6
PMID 22140558
Citations 22
Authors
Affiliations
Soon will be listed here.
Abstract

Nonribosomal peptides (NRPs) and polyketides (PKs) are ecologically important secondary metabolites produced by bacteria and fungi using multidomain enzymes called nonribosomal peptide synthetases (NRPSs) and polyketide synthases (PKSs), respectively. Previous phylogenetic analyses of fungal NRPSs and PKSs have suggested that a few of these genes were acquired by fungi via horizontal gene transfer (HGT) from bacteria, including a hybrid NPS/PKS found in Cochliobolus heterostrophus (Dothideomycetes, Ascomycota). Here, we identify this hybrid gene in fungi representing two additional classes of Ascomycota (Aspergillus spp., Microsporum canis, Arthroderma spp., and Trichophyton spp., Eurotiomycetes; Chaetomium spp. and Metarhizium spp., Sordariomycetes) and use phylogenetic analyses of the most highly conserved domains from NRPSs (adenylation (A) domain) and PKSs (ketoacyl synthase (KS) domain) to examine the hypothesis that the hybrid NPS7/PKS24 was acquired by fungi from bacteria via HGT relatively early in the evolution of the Pezizomycotina. Our results reveal a unique ancestry of the A domain and KS domain in the hybrid gene relative to known fungal NRPSs and PKSs, provide strong evidence for HGT of the hybrid gene from a putative bacterial donor in the Burkholderiales, and suggest the HGT event occurred early in the evolution of the filamentous Ascomycota.

Citing Articles

Uneven distribution of prokaryote-derived horizontal gene transfer in fungi: a lifestyle-dependent phenomenon.

Liu F, Wang S, Cheewangkoon R, Zhao R mBio. 2024; 16(1):e0285524.

PMID: 39611838 PMC: 11708051. DOI: 10.1128/mbio.02855-24.


Bioprospecting : A Systematic Roadmap to Screen Genomes and Natural Products for Biocontrol Applications.

Rush T, Shrestha H, Gopalakrishnan Meena M, Spangler M, Ellis J, Labbe J Front Fungal Biol. 2023; 2:716511.

PMID: 37744103 PMC: 10512312. DOI: 10.3389/ffunb.2021.716511.


Diversity and Biosynthetic Potential of Fungi Isolated from St. John's Island, Singapore.

Munusamy M, Tan K, Nge C, Gakuubi M, Crasta S, Kanagasundaram Y Int J Mol Sci. 2023; 24(2).

PMID: 36674548 PMC: 9861175. DOI: 10.3390/ijms24021033.


Metagenomics Shines Light on the Evolution of "Sunscreen" Pigment Metabolism in the Teloschistales (Lichen-Forming Ascomycota).

Llewellyn T, Nowell R, Aptroot A, Temina M, Prescott T, Barraclough T Genome Biol Evol. 2023; 15(2).

PMID: 36634008 PMC: 9907504. DOI: 10.1093/gbe/evad002.


Fungal Communities Are More Sensitive to the Simulated Environmental Changes than Bacterial Communities in a Subtropical Forest: the Single and Interactive Effects of Nitrogen Addition and Precipitation Seasonality Change.

He D, Guo Z, Shen W, Ren L, Sun D, Yao Q Microb Ecol. 2022; 86(1):521-535.

PMID: 35927588 DOI: 10.1007/s00248-022-02092-8.


References
1.
Doolittle W . You are what you eat: a gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes. Trends Genet. 1998; 14(8):307-11. DOI: 10.1016/s0168-9525(98)01494-2. View

2.
Landan G, Cohen G, Aharonowitz Y, Shuali Y, Graur D, Shiffman D . Evolution of isopenicillin N synthase genes may have involved horizontal gene transfer. Mol Biol Evol. 1990; 7(5):399-406. DOI: 10.1093/oxfordjournals.molbev.a040615. View

3.
Penalva M, Moya A, Dopazo J, Ramon D . Sequences of isopenicillin N synthetase genes suggest horizontal gene transfer from prokaryotes to eukaryotes. Proc Biol Sci. 1990; 241(1302):164-9. DOI: 10.1098/rspb.1990.0081. View

4.
Finking R, Marahiel M . Biosynthesis of nonribosomal peptides1. Annu Rev Microbiol. 2004; 58:453-88. DOI: 10.1146/annurev.micro.58.030603.123615. View

5.
Weber G, Schorgendorfer K, Leitner E . The peptide synthetase catalyzing cyclosporine production in Tolypocladium niveum is encoded by a giant 45.8-kilobase open reading frame. Curr Genet. 1994; 26(2):120-5. DOI: 10.1007/BF00313798. View