PDBe: Protein Data Bank in Europe

Overview

Journal Nucleic Acids Res

Publisher Oxford University Press

Specialty Biochemistry

Date 2011 Nov 24

PMID 22110033

Citations 51

Authors

S Velankar

Y Alhroub

C Best

S Caboche

M J Conroy

J M Dana

M A Fernandez Montecelo

G van Ginkel

A Golovin

S P Gore

A Gutmanas

P Haslam

P M S Hendrickx

E Heuson

M Hirshberg

M John

I Lagerstedt

S Mir

L E Newman

T J Oldfield

A Patwardhan

L Rinaldi

G Sahni

E Sanz-Garcia

S Sen

R Slowley

A Suarez-Uruena

G J Swaminathan

M F Symmons

W F Vranken

M Wainwright

G J Kleywegt

Affiliations

Soon will be listed here.

Abstract

The Protein Data Bank in Europe (PDBe; pdbe.org) is a partner in the Worldwide PDB organization (wwPDB; wwpdb.org) and as such actively involved in managing the single global archive of biomacromolecular structure data, the PDB. In addition, PDBe develops tools, services and resources to make structure-related data more accessible to the biomedical community. Here we describe recently developed, extended or improved services, including an animated structure-presentation widget (PDBportfolio), a widget to graphically display the coverage of any UniProt sequence in the PDB (UniPDB), chemistry- and taxonomy-based PDB-archive browsers (PDBeXplore), and a tool for interactive visualization of NMR structures, corresponding experimental data as well as validation and analysis results (Vivaldi).

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