A Set of Programs for Analysis of Kinetic and Equilibrium Data
Overview
Biomedical Engineering
Authors
Affiliations
A program package that can be used for analysis of a wide range of kinetic and equilibrium data is described. The four programs were written in Turbo Pascal and run on PC, XT, AT and compatibles. The first of the programs allows the user to fit data with 16 predefined and one user-defined function, using two different non-linear least-squares procedures. Two additional programs are used to test both the evaluation of model functions and the least-squares fits. One of these programs uses two simple procedures to generate a Gaussian-distributed random variable that is used to simulate the experimental error of measurements. The last program simulates kinetics described by differential equations that cannot be solved analytically, using numerical integration. This program helps the user to judge the validity of steady-state assumptions or treatment of kinetic measurements as relaxations.
Plach M, Reisinger B, Sterner R, Merkl R PLoS Genet. 2016; 12(1):e1005836.
PMID: 26824644 PMC: 4732765. DOI: 10.1371/journal.pgen.1005836.
Kuper J, Doenges C, Wilmanns M EMBO Rep. 2005; 6(2):134-9.
PMID: 15654319 PMC: 1299240. DOI: 10.1038/sj.embor.7400330.
Eberhard M, Miyagawa K, Hermsmeyer K, Erne P Naunyn Schmiedebergs Arch Pharmacol. 1995; 353(1):94-101.
PMID: 8750922 DOI: 10.1007/BF00168921.
de Waal A, Meijer A, Verpoorte R Biochem J. 1995; 306 ( Pt 2):571-80.
PMID: 7887913 PMC: 1136556. DOI: 10.1042/bj3060571.
Positive co-operative interaction between the subunits of CeqI restriction endonuclease.
Jobbagy Z, Izsvak Z, Duda E Biochem J. 1992; 286 ( Pt 1):85-8.
PMID: 1520287 PMC: 1133021. DOI: 10.1042/bj2860085.