» Articles » PMID: 22002604

RNAi Promotes Heterochromatic Silencing Through Replication-coupled Release of RNA Pol II

Overview
Journal Nature
Specialty Science
Date 2011 Oct 18
PMID 22002604
Citations 106
Authors
Affiliations
Soon will be listed here.
Abstract

Heterochromatin comprises tightly compacted repetitive regions of eukaryotic chromosomes. The inheritance of heterochromatin through mitosis requires RNA interference (RNAi), which guides histone modification during the DNA replication phase of the cell cycle. Here we show that the alternating arrangement of origins of replication and non-coding RNA in pericentromeric heterochromatin results in competition between transcription and replication in Schizosaccharomyces pombe. Co-transcriptional RNAi releases RNA polymerase II (Pol II), allowing completion of DNA replication by the leading strand DNA polymerase, and associated histone modifying enzymes that spread heterochromatin with the replication fork. In the absence of RNAi, stalled forks are repaired by homologous recombination without histone modification.

Citing Articles

PhpC transcription factor infiltrates heterochromatin to generate cryptic intron-containing transcripts crucial for small RNA production.

Srivastav M, Folco H, Nathanailidou P, Anil A, Vijayakumari D, Jain S Nat Commun. 2025; 16(1):268.

PMID: 39747188 PMC: 11696164. DOI: 10.1038/s41467-024-55736-3.


Chromodomain mutation in S. pombe Kat5/Mst1 affects centromere dynamics and DNA repair.

Li T, Petreaca R, Forsburg S PLoS One. 2024; 19(4):e0300732.

PMID: 38662722 PMC: 11045136. DOI: 10.1371/journal.pone.0300732.


The unusual predominance of maintenance DNA methylation in Spirodela polyrhiza.

Harkess A, Bewick A, Lu Z, Fourounjian P, Michael T, Schmitz R G3 (Bethesda). 2024; 14(4).

PMID: 38190722 PMC: 10989885. DOI: 10.1093/g3journal/jkae004.


Rex1BD and the 14-3-3 protein control heterochromatin organization at tandem repeats by linking RNAi and HDAC.

Gao J, Sun W, Li J, Ban H, Zhang T, Liao J Proc Natl Acad Sci U S A. 2023; 120(50):e2309359120.

PMID: 38048463 PMC: 10723143. DOI: 10.1073/pnas.2309359120.


The Fission Yeast Mating-Type Switching Motto: "One-for-Two" and "Two-for-One".

Arcangioli B, Gangloff S Microbiol Mol Biol Rev. 2023; 87(1):e0000821.

PMID: 36629411 PMC: 10029342. DOI: 10.1128/mmbr.00008-21.


References
1.
Kloc A, Zaratiegui M, Nora E, Martienssen R . RNA interference guides histone modification during the S phase of chromosomal replication. Curr Biol. 2008; 18(7):490-5. PMC: 2408823. DOI: 10.1016/j.cub.2008.03.016. View

2.
Svejstrup J . The interface between transcription and mechanisms maintaining genome integrity. Trends Biochem Sci. 2010; 35(6):333-8. DOI: 10.1016/j.tibs.2010.02.001. View

3.
Volpe T, Kidner C, Hall I, Teng G, Grewal S, Martienssen R . Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi. Science. 2002; 297(5588):1833-7. DOI: 10.1126/science.1074973. View

4.
Lambert S, Mizuno K, Blaisonneau J, Martineau S, Chanet R, Freon K . Homologous recombination restarts blocked replication forks at the expense of genome rearrangements by template exchange. Mol Cell. 2010; 39(3):346-59. DOI: 10.1016/j.molcel.2010.07.015. View

5.
Deshpande A, Newlon C . DNA replication fork pause sites dependent on transcription. Science. 1996; 272(5264):1030-3. DOI: 10.1126/science.272.5264.1030. View