Research-IQ: Development and Evaluation of an Ontology-anchored Integrative Query Tool
Overview
Affiliations
Investigators in the translational research and systems medicine domains require highly usable, efficient and integrative tools and methods that allow for the navigation of and reasoning over emerging large-scale data sets. Such resources must cover a spectrum of granularity from bio-molecules to population phenotypes. Given such information needs, we report upon the initial design and evaluation of an ontology-anchored integrative query tool, Research-IQ, which employs a combination of conceptual knowledge engineering and information retrieval techniques to enable the intuitive and rapid construction of queries, in terms of semi-structured textual propositions, that can subsequently be applied to integrative data sets. Our initial results, based upon both quantitative and qualitative evaluations of the efficacy and usability of Research-IQ, demonstrate its potential to increase clinical and translational research throughput.
ResearchIQ: Design of a Semantically Anchored Integrative Query Tool.
Lele O, Raje S, Yen P, Payne P AMIA Jt Summits Transl Sci Proc. 2015; 2015:97-101.
PMID: 26306248 PMC: 4525255.
Miyoshi N, Pinheiro D, Silva Jr W, Felipe J BMC Bioinformatics. 2013; 14:180.
PMID: 23742129 PMC: 3688149. DOI: 10.1186/1471-2105-14-180.