» Articles » PMID: 21706410

Viral Proteomics: the Emerging Cutting-edge of Virus Research

Overview
Specialties Biology
Science
Date 2011 Jun 28
PMID 21706410
Citations 8
Authors
Affiliations
Soon will be listed here.
Abstract

Viruses replicate and proliferate in host cells while continuously adjusting to and modulating the host environment. They encode a wide spectrum of multifunctional proteins, which interplay with and modify proteins in host cells. Viral genomes were chronologically the first to be sequenced. However, the corresponding viral proteomes, the alterations of host proteomes upon viral infection, and the dynamic nature of proteins, such as post-translational modifications, enzymatic cleavage, and activation or destruction by proteolysis, remain largely unknown. Emerging high-throughput techniques, in particular quantitative or semi-quantitative mass spectrometry-based proteomics analysis of viral and cellular proteomes, have been applied to define viruses and their interactions with their hosts. Here, we review the major areas of viral proteomics, including virion proteomics, structural proteomics, viral protein interactomics, and changes to the host cell proteome upon viral infection.

Citing Articles

Application of Proteomics Technology Based on LC-MS Combined with Western Blotting and Co-IP in Antiviral Innate Immunity.

Liang W, Zhu Z, Zheng C Methods Mol Biol. 2024; 2854:93-106.

PMID: 39192122 DOI: 10.1007/978-1-0716-4108-8_11.


Mass Spectrometry-Based Characterization of the Virion Proteome, Phosphoproteome, and Associated Kinase Activity of Human Cytomegalovirus.

Coute Y, Kraut A, Zimmermann C, Buscher N, Hesse A, Bruley C Microorganisms. 2020; 8(6).

PMID: 32486127 PMC: 7357008. DOI: 10.3390/microorganisms8060820.


Plasma L-Carnitine and L-Lysine Concentrations in HIV-Infected Patients.

Butorov E Open Biochem J. 2018; 11:119-131.

PMID: 29387270 PMC: 5750727. DOI: 10.2174/1874091X01711010119.


Human borna disease virus infection impacts host proteome and histone lysine acetylation in human oligodendroglia cells.

Liu X, Zhao L, Yang Y, Bode L, Huang H, Liu C Virology. 2014; 464-465:196-205.

PMID: 25086498 PMC: 7112117. DOI: 10.1016/j.virol.2014.06.040.


Proteomics reveal energy metabolism and mitogen-activated protein kinase signal transduction perturbation in human Borna disease virus Hu-H1-infected oligodendroglial cells.

Liu X, Yang Y, Zhao M, Bode L, Pan J, Lv L Neuroscience. 2014; 268:284-96.

PMID: 24637096 PMC: 7116963. DOI: 10.1016/j.neuroscience.2014.03.009.


References
1.
Yoder J, Chen T, Gagnier C, Vemulapalli S, Maier C, Hruby D . Pox proteomics: mass spectrometry analysis and identification of Vaccinia virion proteins. Virol J. 2006; 3:10. PMC: 1540416. DOI: 10.1186/1743-422X-3-10. View

2.
Chen L, Tran B, Lin Q, Lim T, Wang F, Hew C . iTRAQ analysis of Singapore grouper iridovirus infection in a grouper embryonic cell line. J Gen Virol. 2008; 89(Pt 11):2869-2876. DOI: 10.1099/vir.0.2008/003681-0. View

3.
Rozen R, Sathish N, Li Y, Yuan Y . Virion-wide protein interactions of Kaposi's sarcoma-associated herpesvirus. J Virol. 2008; 82(10):4742-50. PMC: 2346726. DOI: 10.1128/JVI.02745-07. View

4.
Chertova E, Chertov O, Coren L, Roser J, Trubey C, Bess Jr J . Proteomic and biochemical analysis of purified human immunodeficiency virus type 1 produced from infected monocyte-derived macrophages. J Virol. 2006; 80(18):9039-52. PMC: 1563931. DOI: 10.1128/JVI.01013-06. View

5.
Tong A, Gou L, Lau Q, Chen B, Zhao X, Li J . Proteomic profiling identifies aberrant epigenetic modifications induced by hepatitis B virus X protein. J Proteome Res. 2009; 8(2):1037-46. DOI: 10.1021/pr8008622. View