Comparing the Microbiota of the Cystic Fibrosis Lung and Human Gut

Overview

Journal Gut Microbes

Specialties Gastroenterology
Microbiology

Date 2011 Feb 18

PMID 21326915

Citations 27

Authors

Geraint B Rogers

Mary P Carroll

Lucas R Hoffman

Alan W Walker

David A Fine

Kenneth D Bruce

Affiliations

Soon will be listed here.

Citing Articles

Low-Dose Ketone Monoester Administration in Adults with Cystic Fibrosis: A Pilot and Feasibility Study.

Plaisance E, Bergeron J, Bolyard M, Hathorne H, Graziano C, Hartzes A Nutrients. 2024; 16(22).

PMID: 39599743 PMC: 11597165. DOI: 10.3390/nu16223957.

Longitudinal profiling of the intestinal microbiome in children with cystic fibrosis treated with elexacaftor-tezacaftor-ivacaftor.

Reasoner S, Bernard R, Waalkes A, Penewit K, Lewis J, Sokolow A mBio. 2024; 15(2):e0193523.

PMID: 38275294 PMC: 10865789. DOI: 10.1128/mbio.01935-23.

Gut microbiota in various childhood disorders: Implication and indications.

Saeed N, Al-Beltagi M, Bediwy A, El-Sawaf Y, Toema O World J Gastroenterol. 2022; 28(18):1875-1901.

PMID: 35664966 PMC: 9150060. DOI: 10.3748/wjg.v28.i18.1875.

in Health and Disease.

Abuqwider J, Altamimi M, Mauriello G Microorganisms. 2022; 10(3).

PMID: 35336098 PMC: 8953724. DOI: 10.3390/microorganisms10030522.

An Innovative Protocol for Metaproteomic Analyses of Microbial Pathogens in Cystic Fibrosis Sputum.

Graf A, Striesow J, Pane-Farre J, Sura T, Wurster M, Lalk M Front Cell Infect Microbiol. 2021; 11:724569.

PMID: 34513734 PMC: 8432295. DOI: 10.3389/fcimb.2021.724569.

References

Wilson C, Hooper L, Gordon J, Hultgren S, Parks W . Bacterial exposure induces and activates matrilysin in mucosal epithelial cells. J Cell Biol. 2000; 148(6):1305-15. PMC: 2174301. DOI: 10.1083/jcb.148.6.1305. View

Farrelly V, Rainey F, Stackebrandt E . Effect of genome size and rrn gene copy number on PCR amplification of 16S rRNA genes from a mixture of bacterial species. Appl Environ Microbiol. 1995; 61(7):2798-801. PMC: 167554. DOI: 10.1128/aem.61.7.2798-2801.1995. View

Pedersen S, Kharazmi A, Espersen F, Hoiby N . Pseudomonas aeruginosa alginate in cystic fibrosis sputum and the inflammatory response. Infect Immun. 1990; 58(10):3363-8. PMC: 313661. DOI: 10.1128/iai.58.10.3363-3368.1990. View

Stappenbeck T, Hooper L, Gordon J . Developmental regulation of intestinal angiogenesis by indigenous microbes via Paneth cells. Proc Natl Acad Sci U S A. 2002; 99(24):15451-5. PMC: 137737. DOI: 10.1073/pnas.202604299. View

Hoffman L, Deziel E, DArgenio D, Lepine F, Emerson J, McNamara S . Selection for Staphylococcus aureus small-colony variants due to growth in the presence of Pseudomonas aeruginosa. Proc Natl Acad Sci U S A. 2006; 103(52):19890-5. PMC: 1750898. DOI: 10.1073/pnas.0606756104. View

Espy M, Uhl J, Sloan L, Buckwalter S, Jones M, Vetter E . Real-time PCR in clinical microbiology: applications for routine laboratory testing. Clin Microbiol Rev. 2006; 19(1):165-256. PMC: 1360278. DOI: 10.1128/CMR.19.1.165-256.2006. View

Lyte M . The microbial organ in the gut as a driver of homeostasis and disease. Med Hypotheses. 2009; 74(4):634-8. DOI: 10.1016/j.mehy.2009.10.025. View

Gomez-Alvarez V, Teal T, Schmidt T . Systematic artifacts in metagenomes from complex microbial communities. ISME J. 2009; 3(11):1314-7. DOI: 10.1038/ismej.2009.72. View

Rogers G, Stressmann F, Koller G, Daniels T, Carroll M, Bruce K . Assessing the diagnostic importance of nonviable bacterial cells in respiratory infections. Diagn Microbiol Infect Dis. 2008; 62(2):133-41. DOI: 10.1016/j.diagmicrobio.2008.06.011. View

10.

Harris J, De Groote M, Sagel S, Zemanick E, Kapsner R, Penvari C . Molecular identification of bacteria in bronchoalveolar lavage fluid from children with cystic fibrosis. Proc Natl Acad Sci U S A. 2007; 104(51):20529-33. PMC: 2154465. DOI: 10.1073/pnas.0709804104. View

11.

Frank D, Pace N . Gastrointestinal microbiology enters the metagenomics era. Curr Opin Gastroenterol. 2007; 24(1):4-10. DOI: 10.1097/MOG.0b013e3282f2b0e8. View

12.

Bry L, Falk P, Midtvedt T, Gordon J . A model of host-microbial interactions in an open mammalian ecosystem. Science. 1996; 273(5280):1380-3. DOI: 10.1126/science.273.5280.1380. View

13.

Hooper L, Gordon J . Commensal host-bacterial relationships in the gut. Science. 2001; 292(5519):1115-8. DOI: 10.1126/science.1058709. View

14.

Cosseau C, Devine D, Dullaghan E, Gardy J, Chikatamarla A, Gellatly S . The commensal Streptococcus salivarius K12 downregulates the innate immune responses of human epithelial cells and promotes host-microbe homeostasis. Infect Immun. 2008; 76(9):4163-75. PMC: 2519405. DOI: 10.1128/IAI.00188-08. View

15.

Rogers G, Stressmann F, Walker A, Carroll M, Bruce K . Lung infections in cystic fibrosis: deriving clinical insight from microbial complexity. Expert Rev Mol Diagn. 2010; 10(2):187-96. DOI: 10.1586/erm.09.81. View

16.

Heijerman H . Infection and inflammation in cystic fibrosis: a short review. J Cyst Fibros. 2005; 4 Suppl 2:3-5. DOI: 10.1016/j.jcf.2005.05.005. View

17.

Smith E, Buckley D, Wu Z, Saenphimmachak C, Hoffman L, DArgenio D . Genetic adaptation by Pseudomonas aeruginosa to the airways of cystic fibrosis patients. Proc Natl Acad Sci U S A. 2006; 103(22):8487-92. PMC: 1482519. DOI: 10.1073/pnas.0602138103. View

18.

Vanhoutte T, Huys G, Brandt E, Swings J . Temporal stability analysis of the microbiota in human feces by denaturing gradient gel electrophoresis using universal and group-specific 16S rRNA gene primers. FEMS Microbiol Ecol. 2009; 48(3):437-46. DOI: 10.1016/j.femsec.2004.03.001. View

19.

McIlroy S, Porter K, Seviour R, Tillett D . Extracting nucleic acids from activated sludge which reflect community population diversity. Antonie Van Leeuwenhoek. 2009; 96(4):593-605. DOI: 10.1007/s10482-009-9374-z. View

20.

Macfarlane S, Dillon J . Microbial biofilms in the human gastrointestinal tract. J Appl Microbiol. 2007; 102(5):1187-96. DOI: 10.1111/j.1365-2672.2007.03287.x. View