» Articles » PMID: 21081076

Dynamic Structure of Bombolitin II Bound to Lipid Bilayers As Revealed by Solid-state NMR and Molecular-dynamics Simulation

Overview
Journal Biophys J
Publisher Cell Press
Specialty Biophysics
Date 2010 Nov 18
PMID 21081076
Citations 7
Authors
Affiliations
Soon will be listed here.
Abstract

Bombolitin II (BLT2) is one of the hemolytic heptadecapeptides originally isolated from the venom of a bumblebee. Structure and orientation of BLT2 bound to 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) membranes were determined by solid-state (31)P and (13)C NMR spectroscopy. (31)P NMR spectra showed that BLT2-DPPC membranes were disrupted into small particles below the gel-to-liquid crystalline phase transition temperature (T(c)) and fused to form a magnetically oriented vesicle system where the membrane surface is parallel to the magnetic fields above the T(c). (13)C NMR spectra of site-specifically (13)C-labeled BLT2 at the carbonyl carbons were observed and the chemical shift anisotropies were analyzed to determine the dynamic structure of BLT2 bound to the magnetically oriented vesicle system. It was revealed that the membrane-bound BLT2 adopted an α-helical structure, rotating around the membrane normal with the tilt angle of the helical axis at 33°. Interatomic distances obtained from rotational-echo double-resonance experiments further showed that BLT2 adopted a straight α-helical structure. Molecular dynamics simulation performed in the BLT2-DPPC membrane system showed that the BLT2 formed a straight α-helix and that the C-terminus was inserted into the membrane. The α-helical axis is tilted 30° to the membrane normal, which is almost the same as the value obtained from solid-state NMR. These results suggest that the membrane disruption induced by BLT2 is attributed to insertion of BLT2 into the lipid bilayers.

Citing Articles

Photo-initiated rupture of azobenzene micelles to enable the spectroscopic analysis of antimicrobial peptide dynamics.

Roberson M, Duncan J, Flieth K, Geary L, Tucker M RSC Adv. 2020; 10(36):21464-21472.

PMID: 32879729 PMC: 7449587. DOI: 10.1039/d0ra01920h.


Interspecies Bombolitins Exhibit Structural Diversity upon Membrane Binding, Leading to Cell Specificity.

Roberson M, Smith D, White S, Wallace I, Tucker M Biophys J. 2019; 116(6):1064-1074.

PMID: 30824115 PMC: 6428940. DOI: 10.1016/j.bpj.2019.02.005.


Insight into the interactions, residue snorkeling, and membrane disordering potency of a single antimicrobial peptide into different lipid bilayers.

Jafari M, Mehrnejad F, Doustdar F PLoS One. 2017; 12(11):e0187216.

PMID: 29125878 PMC: 5695277. DOI: 10.1371/journal.pone.0187216.


Dynamic membrane interactions of antibacterial and antifungal biomolecules, and amyloid peptides, revealed by solid-state NMR spectroscopy.

Naito A, Matsumori N, Ramamoorthy A Biochim Biophys Acta Gen Subj. 2017; 1862(2):307-323.

PMID: 28599848 PMC: 6384124. DOI: 10.1016/j.bbagen.2017.06.004.


3D hydrophobic moment vectors as a tool to characterize the surface polarity of amphiphilic peptides.

Reisser S, Strandberg E, Steinbrecher T, Ulrich A Biophys J. 2014; 106(11):2385-94.

PMID: 24896117 PMC: 4052240. DOI: 10.1016/j.bpj.2014.04.020.


References
1.
Naito A . Structure elucidation of membrane-associated peptides and proteins in oriented bilayers by solid-state NMR spectroscopy. Solid State Nucl Magn Reson. 2009; 36(2):67-76. DOI: 10.1016/j.ssnmr.2009.06.008. View

2.
Marassi F, Ma C, Gesell J, Opella S . Three-dimensional solid-state NMR spectroscopy is essential for resolution of resonances from in-plane residues in uniformly (15)N-labeled helical membrane proteins in oriented lipid bilayers. J Magn Reson. 2000; 144(1):156-61. DOI: 10.1006/jmre.2000.2036. View

3.
Gullion T, Schaefer J . Rotational-echo double-resonance NMR. 1989. J Magn Reson. 2011; 213(2):413-7. DOI: 10.1016/j.jmr.2011.09.003. View

4.
Toraya S, Nishimura K, Naito A . Dynamic structure of vesicle-bound melittin in a variety of lipid chain lengths by solid-state NMR. Biophys J. 2004; 87(5):3323-35. PMC: 1304800. DOI: 10.1529/biophysj.104.046102. View

5.
Marassi F, Opella S . A solid-state NMR index of helical membrane protein structure and topology. J Magn Reson. 2000; 144(1):150-5. PMC: 3437921. DOI: 10.1006/jmre.2000.2035. View