Names Are Key to the Big New Biology
Overview
Environmental Health
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Those who seek answers to big, broad questions about biology, especially questions emphasizing the organism (taxonomy, evolution and ecology), will soon benefit from an emerging names-based infrastructure. It will draw on the almost universal association of organism names with biological information to index and interconnect information distributed across the Internet. The result will be a virtual data commons, expanding as further data are shared, allowing biology to become more of a 'big science'. Informatics devices will exploit this 'big new biology', revitalizing comparative biology with a broad perspective to reveal previously inaccessible trends and discontinuities, so helping us to reveal unfamiliar biological truths. Here, we review the first components of this freely available, participatory and semantic Global Names Architecture.
biomonitoR: an R package for managing ecological data and calculating biomonitoring indices.
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taxalogue: a toolkit to create comprehensive CO1 reference databases.
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PhyloMatcher: a tool for resolving conflicts in taxonomic nomenclature.
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PMID: 36374834 PMC: 9662723. DOI: 10.1371/journal.pone.0268162.
Match Algorithms for Scientific Names in FlorItaly, the Portal to the Flora of Italy.
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PMID: 34068389 PMC: 8153551. DOI: 10.3390/plants10050974.