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The Complete Mitochondrial Genome of the Leafminer Liriomyza Trifolii (Diptera: Agromyzidae)

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Journal Mol Biol Rep
Specialty Molecular Biology
Date 2010 Apr 9
PMID 20376704
Citations 12
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Abstract

Liriomyza trifolii (Diptera: Agromyzidae) is one of the most economically significant pests in the world. In this paper we present sequence data for the complete mitochondrial genome of L. trifolii. The circular genome is 16,141 bp long and contains one encoding region including 37 genes and one non-coding A+T-rich region. Gene numbers and organization is similar to that of the typical insect mitochondrial genomes except that two additional tRNA genes are found in the A+T-rich region (tRNA(Thr) and tRNA(Leu(UUR))). All of the protein initiation codons are ATN, except ND1 which begins with GTG and COI which is initiated by the quadruplet ATCA. The 22 tRNA anticodons of L. trifolii match those observed in Drosophila yakuba, and all of tRNAs form the typical cloverleaf structure except for tRNA(Ser(AGN)), which has lost the DHU-arm. The A+T-rich region of L. trifolii also contains two previously noted Diperan features--a highly conserved polyT stretch and a (TA)(n) stretch.

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References
1.
Hua J, Li M, Dong P, Xie Q, Bu W . The mitochondrial genome of Protohermes concolorus Yang et Yang 1988 (Insecta: Megaloptera: Corydalidae). Mol Biol Rep. 2008; 36(7):1757-65. DOI: 10.1007/s11033-008-9379-0. View

2.
Ojala D, Montoya J, Attardi G . tRNA punctuation model of RNA processing in human mitochondria. Nature. 1981; 290(5806):470-4. DOI: 10.1038/290470a0. View

3.
Hu J, Zhang D, Hao J, Huang D, Cameron S, Zhu C . The complete mitochondrial genome of the yellow coaster, Acraea issoria (Lepidoptera: Nymphalidae: Heliconiinae: Acraeini): sequence, gene organization and a unique tRNA translocation event. Mol Biol Rep. 2010; 37(7):3431-8. DOI: 10.1007/s11033-009-9934-3. View

4.
Boore J . Animal mitochondrial genomes. Nucleic Acids Res. 1999; 27(8):1767-80. PMC: 148383. DOI: 10.1093/nar/27.8.1767. View

5.
Cha S, Yoon H, Lee E, Yoon M, Hwang J, Jin B . The complete nucleotide sequence and gene organization of the mitochondrial genome of the bumblebee, Bombus ignitus (Hymenoptera: Apidae). Gene. 2007; 392(1-2):206-20. DOI: 10.1016/j.gene.2006.12.031. View